| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2643 |
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| Symbol | |
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| ID | 1170344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2776723 |
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| End bp | 2779764 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344468 |
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| Product | oxidoreductase, FAD-binding, putative |
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| Protein accession | NP_718227 |
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| Protein GI | 24374184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACCTC TGTTATCACA CCAACAAACC CTAGAACCTG TGTATCTGGC TTATCTTGAT
GCTTTAGAAC AAAGCGCCTA CGCCGGTGAT ATCGATAAAC GCTACAGTGC GCGCTTAGTG
CAAGCCACGG ATAACTCCGT CTATCAATTT TTACCCCAAG CGGTACTTTA TCCCAAGCAT
CAAAAGGATA TTGAGATAGC GCTTAAGCTT GCTGCGAAAG CAGAGTTTGT CGGTGTCACT
TTTAGTGCCA GAGGCGGCGG TACGGGCACC AATGGCCAGT CGCTGACCCA CGGTTTGATC
CTCGATGTTT CCCGTTATAT GAATCGGGTG CTGGAAGTGA ATCCTGAGCA AGGCTGGGTT
AGGGTTGAAG CTGGCGTAAT TAAAGATGCG CTAAATGATG CGCTGCGTCC CCATGGATTC
TTCTTTAGTC CTGATCTATC CACCTCAAAC CGCGCCACTA TTGGCGGTAT GATCAACACC
GACGCCTCGG GCGCGGGCTC CTTGGTATAC GGTAAAACAT CCGACCATGT GCTGGCGCTG
CGCAGTGTAT TGATAGATGG CAGTGTGTTA GATACTCGTC CCCTCGATGC GGGTGTGTTA
GGTGATCCCG ATAATGTCAG TGATAATCCA CTTGGACAAA AACTGATTTC ATCCATTGCA
CAAGTTTGCC GTGACAAGCG AGAACAGATT GAAAAACAAT TCCCTAAGTT AAACCGTTTT
TTAACCGGAT ACGACTTAAA ACATGTCTGG AATGCGGGCT TGACCCAGTT CGATCTCTCG
CGGATTTTGA CAGGTTCCGA GGGCACGCTT GCGGTGATAA CCGAAGCTAA GCTCAACATT
ACGCCATTGC CGAGCGAGCG TGCGATGGTG AATATTAAGT ACGACTCCTT TCAATCGGCG
CTGCGCCATG CCCCTTCCTT AGTGGCTGCA CGGGCAACGG TTGTCGAAAC TGTTGATTCT
AAAGTGCTTA ATCTTGCCCG CGAGGACATT GTCTGGCATT CGGTTTCTGA CTTGATTCAA
GAAGTGCCGG GTAAGACGAT TGATGGCCTC AATATGGTCG AGTTTGCTGG CGATACGGCT
GAGGTTGAGC AAAAGCTTGC GAGTCTTGAA GCGGTTTTGA CTGAGCAAAT TTCCCGCGGT
GAGTGTGGTG TGGTCGGTTA TCAAGTGACC CAAGATAAGG CCAGTATTGA GAAAATCTAC
GGCATGCGTA AAAAGGCCGT TGGTTTACTC GGCGCCACTA AAGGGCGTCG TAAACCCATT
GCTTTTGCTG AAGATACGGC GGTGCCGCCT GAAAAACTTG CCGATTATAT TATGGAGTTT
CGCGCACTAC TCGATAGCCA TAACTTGCAA TACGGTATGT TTGGCCATGT GGATGCGGGC
GTGTTACACG TTAGGCCCGC GCTCGATATG TGCGATGTGG AAGATGAAAA ACTACTTAGG
GTGATTTCCG ATCAAGTGGC GGCTCTAACG CTTAAGTATG GCGGCCTAAT GTGGGGCGAG
CACGGCAAAG GCGTGCGTGG TCAATATGGT CCCGCAGTGT TTGGTGATGA GCTTTATGGT
GTGCTGCAGG AGATAAAAGG GCTATTTGAT CCTGATAACA GGCTTAATCC CGGTAAGTTA
GTTGCGCCAA AACAAGTCGG CAGCTTGGCA TTTGATGTGG ACAGTACCAA GCGCGGTCAG
TTTGACAGGC AAATTCCGGT GGCAGTACGT GATGCTTTTC CCGATGTGAT GAATTGTAAC
GGCAATGGCC TGTGTTTTAA TTACAGTAGT TACTCGCCCA TGTGTCCGTC ATTTAAGGTG
ACTGGTGATA GGGTGCAATC ACCCAAGGGC CGTGCGGGCC TAATGCGTGA GTGGTTGCGT
TTGCTTGAAT CGGAAGGGGT CGATGTGAAC GCGCTGGCGA AAGCCAAACC CTTAGGCATT
TTGCAGCGCA TGCAAAATAC GATTAATGCC AAGCGCGATT ATGATTATTC CCACGAAGTG
ATGGAATCGC TTAAGGGCTG CCTTGCGTGT AAGGCTTGTT CGAGTCAGTG TCCGGTTAAA
GTAGATGTGC CGAAGTTTAG GGCGCAATTC TTTAATATTT ACTATCAACG CTATCTGCGT
CCAGCCAAAG ATTATCTGGT TGCGGGTATT GAAGACAGTT TGCCAATTAT GGCAGCAGCG
CCAAAACTCA CTAATTTTGC CTCGCAAAAT CCGCTCAGTC AGTGGGTAAT CAAAAAGGCT
ATTGGCTATG TAGATGCGCC AGCGTTATCT GTGCCGACCT TAAAACAACG ACTCGATGGT
CATGCAAGCC GTGGTTATGA TTTAGCGGCA TTGCAAGCAA TACCGGTGGC TGAGCGTTCA
AAATTTGTAT TAGTGGTACA AGATCCCTTT AACAGTTTTT ACGATGCGGG ATTGGTGTAT
CGCTTTATCC AATTGATTGA AACCTTAGGG CTAAAACCCG TGTTATTGCC CTTTAAGCCC
AACGGTAAAC CCACTCATAT CAAAGGCTTT TTGGATAAAT TTGCCAAAAC AGCTCAATCG
AGCGCGGATT TCTTAAACCA AGTACATAAG TTAGGCATGC CGATGATTGG GATCGACCCC
GCCTTAGTGC TCTGCTATCG CGATGAGTAT AAAGAGGTTT TAGGTGCTAA CCGTGGTTCA
TTTGAAGTGA AATTAGCTAA TGAATGGTTA CTTGGCATTT TACACCATAT CCCGGCCAAG
CCCATGCAAG ATAAGCAATT TACTTGGTTT AGTCATTGTA CTGAATCTAC TGCTAAGCCG
AATACGGCCA ATGAATGGAC GAAAATTTTT AGCCATTTTG GTACGAAATT GACGGCGGTG
AATTTAGGCT GCTGTGGTAT GGCGGGCACC TACGGCCATG AAGCCGAAAA CCTTGAACGG
TCTAAGGCTT TGTTTGATAT GTCATGGAAA AACACATTAA GTAAGATGGA TCAGTCACAG
GTGCTTGTCT CGGGCTACTC TTGTCGCAGC CAAGTAAAGC GTTTTGCTGG TTATAAGCCA
AAACATCCAT TAGAGGCTTT ATTGGAGCTC GTTAATTCTT AA
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| Protein sequence | MLPLLSHQQT LEPVYLAYLD ALEQSAYAGD IDKRYSARLV QATDNSVYQF LPQAVLYPKH
QKDIEIALKL AAKAEFVGVT FSARGGGTGT NGQSLTHGLI LDVSRYMNRV LEVNPEQGWV
RVEAGVIKDA LNDALRPHGF FFSPDLSTSN RATIGGMINT DASGAGSLVY GKTSDHVLAL
RSVLIDGSVL DTRPLDAGVL GDPDNVSDNP LGQKLISSIA QVCRDKREQI EKQFPKLNRF
LTGYDLKHVW NAGLTQFDLS RILTGSEGTL AVITEAKLNI TPLPSERAMV NIKYDSFQSA
LRHAPSLVAA RATVVETVDS KVLNLAREDI VWHSVSDLIQ EVPGKTIDGL NMVEFAGDTA
EVEQKLASLE AVLTEQISRG ECGVVGYQVT QDKASIEKIY GMRKKAVGLL GATKGRRKPI
AFAEDTAVPP EKLADYIMEF RALLDSHNLQ YGMFGHVDAG VLHVRPALDM CDVEDEKLLR
VISDQVAALT LKYGGLMWGE HGKGVRGQYG PAVFGDELYG VLQEIKGLFD PDNRLNPGKL
VAPKQVGSLA FDVDSTKRGQ FDRQIPVAVR DAFPDVMNCN GNGLCFNYSS YSPMCPSFKV
TGDRVQSPKG RAGLMREWLR LLESEGVDVN ALAKAKPLGI LQRMQNTINA KRDYDYSHEV
MESLKGCLAC KACSSQCPVK VDVPKFRAQF FNIYYQRYLR PAKDYLVAGI EDSLPIMAAA
PKLTNFASQN PLSQWVIKKA IGYVDAPALS VPTLKQRLDG HASRGYDLAA LQAIPVAERS
KFVLVVQDPF NSFYDAGLVY RFIQLIETLG LKPVLLPFKP NGKPTHIKGF LDKFAKTAQS
SADFLNQVHK LGMPMIGIDP ALVLCYRDEY KEVLGANRGS FEVKLANEWL LGILHHIPAK
PMQDKQFTWF SHCTESTAKP NTANEWTKIF SHFGTKLTAV NLGCCGMAGT YGHEAENLER
SKALFDMSWK NTLSKMDQSQ VLVSGYSCRS QVKRFAGYKP KHPLEALLEL VNS
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