Gene SO_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2642 
Symbol 
ID1170343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2776145 
End bp2776624 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID637344467 
Producthypothetical protein 
Protein accessionNP_718226 
Protein GI24374183 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATG TTATTGACAC ACTACAGGAA TTCACTAGCA AGCCAAAGCT GGATGACGTC 
GTCACACGGC CAACGGAGCT GTGTAGTGAA GTCGCGCTAT TTCGTATCCA ACTCTCCGGT
GACTGGTTAT ATCAGGGCAG TCCATTACCG ACTAAGTTTG CCAAATTGTT TGCCAGTATT
TTACATTGTA TTGATGGTGA GCATTTTCTG ATCACGCCTG TGGAGAAAGT GCGGCTTGAG
GTGGAAGATG CGCCACTGCT GATTGTCGAT TATCTAAAGC ATGCAGAAGC GCCAATGTTA
ACCTTGAAAA CCAGTATTGG CACTGAACAT CACCTTACCG ATTTCAATCA GCTCAAGCTA
ACCGACTTTG GGATTTATCT GCCTTTAGAG CGTGGTCTAT GGGCAAAATT AAACCGTGCC
TGCTACTACA ATTTTGTGAA TGAATTCAAT TTAACCGATG ATGATGGTCT CAATGCTTAG
 
Protein sequence
MDNVIDTLQE FTSKPKLDDV VTRPTELCSE VALFRIQLSG DWLYQGSPLP TKFAKLFASI 
LHCIDGEHFL ITPVEKVRLE VEDAPLLIVD YLKHAEAPML TLKTSIGTEH HLTDFNQLKL
TDFGIYLPLE RGLWAKLNRA CYYNFVNEFN LTDDDGLNA