Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2642 |
Symbol | |
ID | 1170343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2776145 |
End bp | 2776624 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637344467 |
Product | hypothetical protein |
Protein accession | NP_718226 |
Protein GI | 24374183 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAATG TTATTGACAC ACTACAGGAA TTCACTAGCA AGCCAAAGCT GGATGACGTC GTCACACGGC CAACGGAGCT GTGTAGTGAA GTCGCGCTAT TTCGTATCCA ACTCTCCGGT GACTGGTTAT ATCAGGGCAG TCCATTACCG ACTAAGTTTG CCAAATTGTT TGCCAGTATT TTACATTGTA TTGATGGTGA GCATTTTCTG ATCACGCCTG TGGAGAAAGT GCGGCTTGAG GTGGAAGATG CGCCACTGCT GATTGTCGAT TATCTAAAGC ATGCAGAAGC GCCAATGTTA ACCTTGAAAA CCAGTATTGG CACTGAACAT CACCTTACCG ATTTCAATCA GCTCAAGCTA ACCGACTTTG GGATTTATCT GCCTTTAGAG CGTGGTCTAT GGGCAAAATT AAACCGTGCC TGCTACTACA ATTTTGTGAA TGAATTCAAT TTAACCGATG ATGATGGTCT CAATGCTTAG
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Protein sequence | MDNVIDTLQE FTSKPKLDDV VTRPTELCSE VALFRIQLSG DWLYQGSPLP TKFAKLFASI LHCIDGEHFL ITPVEKVRLE VEDAPLLIVD YLKHAEAPML TLKTSIGTEH HLTDFNQLKL TDFGIYLPLE RGLWAKLNRA CYYNFVNEFN LTDDDGLNA
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