Gene SO_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2622 
Symbol 
ID1170324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2758935 
End bp2759405 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID637344449 
Producthypothetical protein 
Protein accessionNP_718207 
Protein GI24374164 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAC CTACACTAGC AAGCTTTATG TTTATTTGTG CTTTTGTGAT ATCTCCTGTA 
CAGGCGGGGT ACGATCGCAA TCAGGCCGTG CCAGTTGAAA AAGTGCTTTA TGGAGATATT
AATTCAGTGC GTAATATCAC CGAAACACAA TTGATTGAAG ACCGAAATCA AGGCTGGAAA
ACTTTTGGTG GTGCCTTGGC TGGTGGTGTT ATCGGTCATC AGTTTGGTGG TGGCTCAGGC
CAAGATATCG CGACAGTATT GGGCGCCTTA ATTGGTGCTG GCGTTGGTAA TCGTTACGGT
AGTGGTACGA CGGTGCAAAC ACTCAAGCTG GTGGAGCTGA TGATCACGCA GGAAGACGGC
AGTCAAGTCA TGGTGATCCA AGATTATGAT CCCGGCATGA TATTTAATGC GGGGGATAGG
GTAAGGGTGG TGTACTTGCA AGGTGGTGTG CGCATTGATT TAGCGATGTA A
 
Protein sequence
MWKPTLASFM FICAFVISPV QAGYDRNQAV PVEKVLYGDI NSVRNITETQ LIEDRNQGWK 
TFGGALAGGV IGHQFGGGSG QDIATVLGAL IGAGVGNRYG SGTTVQTLKL VELMITQEDG
SQVMVIQDYD PGMIFNAGDR VRVVYLQGGV RIDLAM