| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2615 |
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| Symbol | pabC |
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| ID | 1170317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2751361 |
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| End bp | 2752170 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344442 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | NP_718200 |
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| Protein GI | 24374157 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTGGG TTAATGGGGT ATTACAAGCA AGCATTGCCC CAACGGATAG GGGGCTTGCC
TATGGTGATG GCCTCTTTGC CACGATGCGA AGTAGCAAGC GTGGCATTTT ATTTTTTCAG
CAGCACCAAG CACGTTTAGA GACTGGTGCA GCAAGGCTTG GGTTTGACTG GCAAATGAGT
CCAGCCCTTG CCGAGCAGCT CGATACACTC GCCGCGCAGT ATCCACAGCA CTGTATTAAA
TTGATGGTTA CACGTGGGGT TGGGGGCCGA GGCTATGCGC CGCCTGAGCA AGTAAACGTC
ACGGAAGTCG TTTCTGTTCA TCCCATTCCT GCCCATTATG CCGCGTGGCA GCAACAGGGG
ATTCGTCTTA AAACCTCCGC CGTACAATTG GGGCATCAAC CCTTATTGGC AGGGATAAAA
CACCTTAATC GCCTCGAGCA AGTGCTGATT AAATCCCTGC CCTTGCCGCA GGGGTATGAT
GATTGGCTTG TACTCGATTG TATGGGTAAG GTGATTGAGT CCTCCATGGC AAATATCTTT
TTTATTAAGG ATAATCAGGT TGTTACTCCG TCATTGGAGC ACTGCGGTGT CGCGGGTGTT
ATGCGTGAGC AAGTTATGTT AGCCTTACTT GCACTGCAGA TGGATATCGA TTGTTTGCCG
TTTGGCGCCG AGCGTTTAGT GGAGTTTGAC TCGGCATTTA TCACTAACAG TGTCTTAGGC
GTAGTGGATG TACTCGCGAT CGATTCGCAC AGCTTCAAGC CTTCTCCTTT GACCGCAGAT
CTTAGACAAA CACTTTCACT CTCACTATGA
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| Protein sequence | MIWVNGVLQA SIAPTDRGLA YGDGLFATMR SSKRGILFFQ QHQARLETGA ARLGFDWQMS
PALAEQLDTL AAQYPQHCIK LMVTRGVGGR GYAPPEQVNV TEVVSVHPIP AHYAAWQQQG
IRLKTSAVQL GHQPLLAGIK HLNRLEQVLI KSLPLPQGYD DWLVLDCMGK VIESSMANIF
FIKDNQVVTP SLEHCGVAGV MREQVMLALL ALQMDIDCLP FGAERLVEFD SAFITNSVLG
VVDVLAIDSH SFKPSPLTAD LRQTLSLSL
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