Gene SO_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2613 
Symboltmk 
ID1170315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2749728 
End bp2750357 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID637344440 
Productthymidylate kinase 
Protein accessionNP_718198 
Protein GI24374155 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAG CATCCGCCAA ATTCATCGTA GTTGAAGGAC TGGAAGGCGC TGGCAAATCG 
AGTGCGATTG CCCTTATTCG TGATTTTATT GAAAAACATA CCGGCCATGC ACCAGTATGC 
ACCCGTGAGC CTGGTGGCAC GCCGCTGGCC GAGCGCATTC GTGATTTAGT GAAAATTGCC 
GACCCAAGCG ATCCTTTATG TGACGAGTCC GAATGTTTAC TTATCTATGC CGCCAGAGCG 
CAACTGGTTG CTAATGTGAT CAAGCCTGCC TTAGCCCAAG GAAACTGGGT ACTTGGAGAT 
AGGCACAATC TATCATCCCT TGCATATCAA GGCGGTGGAC GCGGCTTAAT GCCTTTAGTG 
GAGGCCGTAA GTAACGCAAC ACTAAAAGGG TTTAAACCCG ATCTAACCCT CTATCTTGAC 
CTTGACCCTA AACTTGGGCT GCAACGTGCG GCAAAGCGGG GTGAACTTGA TAGAATTGAG 
CAACAAGCCA TCGACTTTTT TGAGCGGGCA CGAGCAACTT ACCTCAAACT TGCCAGTGAA 
GATGAGTGTA TCGTGGTGAT TGATGCCAGC CAAACGATGG CCGAAGTGCA TAAAGATATT 
CTGGCCGTGT TACAGGCGAT GGCATGGTAG
 
Protein sequence
MTQASAKFIV VEGLEGAGKS SAIALIRDFI EKHTGHAPVC TREPGGTPLA ERIRDLVKIA 
DPSDPLCDES ECLLIYAARA QLVANVIKPA LAQGNWVLGD RHNLSSLAYQ GGGRGLMPLV 
EAVSNATLKG FKPDLTLYLD LDPKLGLQRA AKRGELDRIE QQAIDFFERA RATYLKLASE 
DECIVVIDAS QTMAEVHKDI LAVLQAMAW