Gene SO_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2612 
SymbolholB 
ID1170314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2748778 
End bp2749734 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID637344439 
ProductDNA polymerase III, delta prime subunit 
Protein accessionNP_718197 
Protein GI24374154 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAGC ACCGTGGATT TGATGTGTTA AGCCTGCCTT GGCTCGATGT GCCAAGACAG 
GCGTTTTTAA CCCAGTTACA AACCCAAAAA GTCCCCCATG CGCAACTAGT GGGTATCGAT
TCCGCCTATG GTGGGGAACT CTTGAGTGTG TTTATGGCGC GCGCTGCCAT GTGTTCACAA
CCCACTCACA CAGGAGGATG CGGTTTTTGT AAGTCCTGCC AGTTATTTGA TGCGGGTAAT
CATCCTGATT TTTATCAAAT CGAGGCCGAT GGCCATCAAA TCAAAGTCGA TCAAATTCGT
GAGCTTTGTA GCCGCTTAAG TGCGACTGCC CAGCAAAGTG GCCGCCGTGT AGCCATTATC
CACCATAGCG AGCGTTTAAA CTCAGCATCT GCGAATGCGC TACTTAAGAC ACTCGAAGAG
CCAGGTAAAG ATACTTTACT GCTATTACAT TCCGATACGC CTGCACGTTT AATGGCCACG
ATCAGCAGCC GTTGTCAAAG ACTTCCCTTT GTGGCTCCGT CTAAGACCTT GATCAAAAAT
TGGCTAATTC AGCAATGCCA GATCCAAGAG GATGTGACTT GGTGCTTGAG TGTGGTCGGC
GGCCCATTAA AGTTGGCAGA GAGTTTGCAA TCAAATAGCA CGCAGCCTAG TCGTTATCAA
ACCTTATTAG GTTTTCGCAA AGATTGGGCG CAAAGTTTGT CGTCGGGCCA TCTGTGTGCT
AGCTTGTTAA TAATAAGTGA ACAGCAAATT ATTGATGCTC TTAAGGTTTT ATACTTACTT
TTGAGACAAA TTTTATTGAA GAATGGCAAC CAAGATGCGT ATGTTCAGGC GCAAATAGGG
AACTTGGCGG CGAAAGTCAT GGGAATGTGT CATAGCTTAA GTGCCATGCC AAGTGTCAAT
TATTTGGGCT TGTGTCAAAG TTATGTTTTA GAATATAGAG ATATAACAAA TAAGTAA
 
Protein sequence
MVEHRGFDVL SLPWLDVPRQ AFLTQLQTQK VPHAQLVGID SAYGGELLSV FMARAAMCSQ 
PTHTGGCGFC KSCQLFDAGN HPDFYQIEAD GHQIKVDQIR ELCSRLSATA QQSGRRVAII
HHSERLNSAS ANALLKTLEE PGKDTLLLLH SDTPARLMAT ISSRCQRLPF VAPSKTLIKN
WLIQQCQIQE DVTWCLSVVG GPLKLAESLQ SNSTQPSRYQ TLLGFRKDWA QSLSSGHLCA
SLLIISEQQI IDALKVLYLL LRQILLKNGN QDAYVQAQIG NLAAKVMGMC HSLSAMPSVN
YLGLCQSYVL EYRDITNK