| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2601 |
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| Symbol | |
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| ID | 1170303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2736274 |
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| End bp | 2738322 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344429 |
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| Product | carboxy-terminal protease |
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| Protein accession | NP_718187 |
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| Protein GI | 24374144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGCGAA AACTCATTTT GGCTACATCC ATCGCCACTG TTTTTGTCGG ATTCTCGGCT
TGGGCTGTGC CTCCTACAAT TCAAATCAGC GAGTTACCCA CTCTCAAGCA GGAAGCGCAG
CATAAAGTGG CCAGTAAGCG AGTGACGGAT TTATATACTC GTTCGCATTA CCACCGATTT
GCGCTCGATG ACGCGTTTTC TGCGCAGATA TTTGACCGCT ATTTACAGCA ACTTGATTAC
CGTCGCAATG TGCTGACCCA AGCCGATGTC GACAGTTTTA AACCTTATAT CAATCAGTTT
GACGACATGC TTAGTTCAGG TGAACTCGAT CCTGCATACA AAATGTTTGA TTTGGTTCAA
AAACGTCGCT ACGAAGGCTT TGTGTACGCG CTTTCTCTGC TCGATAAAGA AATGGACTTT
ACCGCCCCTG GTGATGTCTA CGATTATGAT CGGGAAGATG TTGCTTGGCC GAAAGATCAA
GCTGAAATCA ATGAACTTTG GCGTCAGCGA GTCAAATATG ACGCGTTGAA TCTCAAGCTT
ACTGGCAAAA AATGGCTTGA AATCGTTGAT ATTCTGCAAA AGCGTTATAA CAACGCCATC
AAACGTTTGA CTCAGACCAA TAGCGAAGAT GTGTTCCAAG CCGTGATGAA CGCGTTTTCA
CGCAGCATAG AGCCGCACAC TAGCTATTTA TCCCCCCGTA ATGCCGAGCG TTTCCAAATG
GAAATGAACT TAAGCCTTGA GGGTATTGGC GCGCAGTTAC AGCTCGAAGA TGATTACACT
GTGATTAAGA GTTTGATCGC GGGTGGTCCT GCGGCTGGCA GTGAGAAACT GTCACCAGAA
GATAAGATTG TCGGTGTCGG CCAAGAAGGC GGCGAGATTG TTGATGTTAT CGGCTGGCGT
TTAGACGATG TGGTCGAACT CATCAAAGGA CCTAAGGGCA GTAAAGTCGT TTTGCAGATT
TTACCGAAGA AAGGCGGCTC AAATGCTAAG CCGTTTAACG TGACCTTAGT GCGTGACAAA
ATTCGCTTAG AAGACCGTGC AGCCACTTCA AAGATCATCG AACCTAAAGA CGGTGTATAC
GCCAATCGTA AAGTCGGTGT GATCCAGATC CCTGGATTCT ATATGAATTT ATCCCAGGAT
GTTGAAAAGG AACTACTTAA GCTGAATGAA GCCAAAGTCG AAGGTGTGGT TATCGATTTA
CGTGGTAACG GCGGTGGCGC ATTAACTGAA GCTGTGTTAC TGACCGGACT CTTTATCGAT
ATGGGACCAG TAGTACAAGT CCGTGATGCC GATGGTCGTG TATCCGCTCA CCGTGATAAC
GATGGTAAGA CGACTTACAC AGGTCCGTTG ACCGTGATGG TTGACCGTTA TAGTGCATCA
GCTTCTGAGA TTTTCGCAGC AGCATTACAG GACTATGACC GTGCACTGAT TGTCGGAGAA
TCCAGTTTCG GTAAGGGTAC AGTACAACAG CACAAGAGCC TAGGTCGTAT CTACGATATG
TACGAGAAGC CAATTGGCCA TGTGCAATAC ACCATTCAGA AGTTTTATCG GATTAACGGT
GGTAGTACTC AACTGAAAGG TGTGACACCG AATATTGCTT ATCCAAGTGC ATTAGAGCCT
GGTGAATACG GTGAAGCTGA AGAGAAGAAT GCTTTGCCTT GGGACAAAGT CCCGATGGCG
CAATATGGCA CGCTAAACGA TATCACTCCT GAACTGGTGG CGAGTTTAGA GAAAAAGCAC
CTTGCTCGAA TTCAAAACAG TGTTGAATTT AACTATATCA ATCAAGATAT TGCTGACTTT
AAAAAGCATC ACAAAGAGAA AACGGTCTCC TTAGTTGAAA GTGAGCGTAT TGCATCACGT
GAAGCTGATG AGAAGAAAGT GCTCGATAGA ACCAATGAGC GTCGTGTTGC CAATGGTTTA
GCGCCTGTTA AATCGATGGA AGACATTAAA GACGATGTCG TAGCACCAGA TGCATTTTTA
GATGAAACGG CGTATATCAC CTTAGATATG GTGGATGCGA AAAAGCTAGC TAACGCTGGC
ACTAAATAG
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| Protein sequence | MMRKLILATS IATVFVGFSA WAVPPTIQIS ELPTLKQEAQ HKVASKRVTD LYTRSHYHRF
ALDDAFSAQI FDRYLQQLDY RRNVLTQADV DSFKPYINQF DDMLSSGELD PAYKMFDLVQ
KRRYEGFVYA LSLLDKEMDF TAPGDVYDYD REDVAWPKDQ AEINELWRQR VKYDALNLKL
TGKKWLEIVD ILQKRYNNAI KRLTQTNSED VFQAVMNAFS RSIEPHTSYL SPRNAERFQM
EMNLSLEGIG AQLQLEDDYT VIKSLIAGGP AAGSEKLSPE DKIVGVGQEG GEIVDVIGWR
LDDVVELIKG PKGSKVVLQI LPKKGGSNAK PFNVTLVRDK IRLEDRAATS KIIEPKDGVY
ANRKVGVIQI PGFYMNLSQD VEKELLKLNE AKVEGVVIDL RGNGGGALTE AVLLTGLFID
MGPVVQVRDA DGRVSAHRDN DGKTTYTGPL TVMVDRYSAS ASEIFAAALQ DYDRALIVGE
SSFGKGTVQQ HKSLGRIYDM YEKPIGHVQY TIQKFYRING GSTQLKGVTP NIAYPSALEP
GEYGEAEEKN ALPWDKVPMA QYGTLNDITP ELVASLEKKH LARIQNSVEF NYINQDIADF
KKHHKEKTVS LVESERIASR EADEKKVLDR TNERRVANGL APVKSMEDIK DDVVAPDAFL
DETAYITLDM VDAKKLANAG TK
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