| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2593 |
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| Symbol | |
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| ID | 1170295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2720872 |
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| End bp | 2725716 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344421 |
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| Product | hypothetical protein |
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| Protein accession | NP_718179 |
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| Protein GI | 24374136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCAGTA CTACTTGAAA ATGTAGTCAG TTTAATTCAC
GCTAAAGTCC CTAATTCACA AGCCAAGCAA GTTGAACAGT TCGCGACCTG CCTTTATGCC
CACATGTCTA AAGACGACCT CAATGCGCGT AATGACAGCG ATCTGTACGG TGCCGTCCTC
AGTTTATGGA ACGCACTGAA CAAAACCCCG AAAGGGGAAA CTCACCTCAG AGTATTCAAT
CCAAGTCAGT CAAAACATGG CTGGCAATCA ACCCATTCGA TCATTGAAGT CATCCAACCA
GATATGCCAT TTTTGGTAGA TTCTGTTGGT ATGGCCTTGA ATCGTATGGG TATTACGGCT
CATGTGATGT TACATACTCC GCTGGCGATT GAGCGTTCAG CGCAAGAAGT GACTAAAGTA
ACTTATCTGA ACCAAAGCCC TGACAGCACT GAACATGTTG CGGTTTTCTT AATTGAAATC
GATCGCCAAA GCAGCACTGC GGACATCAAA GCTCTTGAAC GCGAAATCCA ATCTGTGCTC
GCCGATGTTG CCGCATCAGT CAACGATTGG GGTGCGATGT CAGCTAAGTT GAGCGAGACC
ATTAAAGAGT TACCTAAACG TCCATTTCCC GGTGAGAAGC AAGAGTTAGA AGAAGCGATT
AACTTCCTAA CTTATCTTAA TAATCATCAT TTTACCTTAC TGGGTTACCG TCAATACGAT
TTAAAACGTG TTGAAGGGGA TGTTGAGCTA GTACCGAATA TAGCCTCTAG CTTAGGTTTA
ATGAACAAAC ACCATAAGAC TCAGCCAGAG CAAGGTTTGT TATTATCAAG CTTCTCTGAC
AGTGCCCGTA AAGAAGCCTT AGACCACAGT TTACTGATCC TGACGAAGAG CAGTGCCAAG
AGCCGCGTGC ACCGTCCAGC CTATGTCGAC TATATCGGTA TTAAACGCTT CGATAAAAAA
GGCAATGTGA TCGGTGAAGA CAGATTTATC GGTTTATACG CCTCAAATGT ATATAACCGC
AGCCCACGTG AGATCCCGCT GCTGAACGAA AAAGTCCAGC GCGTATTAGA CCGTTCAGGT
TTAACACCTC GATCTCACGA CTATAAAGCC CTACTGAACA TTCTCGAAAA CTTACCGCGC
GATGAGCTAA TTCAAGCTAA TGTGGATGAT TTAGCACACA CAGCGCACGG TGTGCTCGAG
ATGCAAGATA GGGATAAACT GAAGCTCTTT GTTCGCAAAG ACGGTTTCGG TCGTTTCTTA
TCCTGTTTAG TGTATGTATC TAAAGATCGT TACAACACTA AGCTTCGCCA AGATACCCAA
CGTATTCTGG CTCAACATTT CAACAGTAAA GAAGATGTAG AGTTTACGAC GTATTTCTCC
GAGTCGACCC TGGCACGTAC TCACTACATT GTCAAAGTTG ATAACAATAA TATGGATGTA
GATGTGGCTG CCATAGAGAA CAACTTAATA GAAGCGGCAC GTTCTTGGGA AGATAAGTTA
AATACTGCGC TAAACAACGC CTTAGGTGAA GAAGCCGGTA CTCATCTGAT GAAGCGTTAC
GCTAACGCCT TCGAACAAAG CTATAAGGAA GATGTGCTGC CAAGCTCCGC CGTTGTGGAT
ATGCAACAGC TCGAAGCCTT GGACGACGAA CACAAACTGG GTATGTTGTT CTATCAACCG
CAGGAAGCTG CGCTGAATGA CAACAAAGTG CGTTTAAAAC TGTTCCATAA AGATGAGCCA
ATTCATCTTT CTGACGTGCT GCCAATGCTC GAAAACTTTG GTTTGCGTGT GATTAACGAA
CGCCCTTATG AAGTCACCAC CGCAGACGGC TCAACCTTCT GGATTTTAGA CTTCTTAATG
ACAGTGAAAG TTGTCAACAC CGACAATATC GCTGATAGCC AAGACAGATT CCAAACAGCA
CTGTCACAAG TGTGGCAAAA GAAGTTAGAA GATGATGGTT TTAACCGCAT TATTCTGGCC
TCTGGCTTAA CGGGCCGTGA AGTCTCTGTA TTGCGCGCGT ATGCGAAATA TATGCGTCAA
ATCGATGCGA CCTTTAGCCA AGCTTATATT GAAGAAACCT TCGGCCGTTA CCCTCAAATC
GCTGATTTGT TGGTGAAAAT GTTTATTCGT AAGTTCAATC CTAAACTGAA GACCCGTACA
CTGGGCAAGT TTATGGAGCA AATTAACCTA CGTTTAGACG AAGTATCAAG TCTCGATGAT
GACCGTATCA TTCGTCGCTA TTTAGACTTG ATTAACGCCA CACTGCGTAC CAACTTTTAT
CAACTGGATG CCAAAGGCGA ATCTAAGAGT TATATCTCGT TTAAATTCAT GCCTTCGTTG
ATCCCTGAAA TGCCACGTCC ACTGCCGAAA TTCGAAATTT TCGTCTATTC GCCACGGGTT
GAAGGTGTGC ATTTACGTTA CGGTAAAGTG GCGCGTGGTG GTCTGCGTTG GTCTGATCGC
CGTGAAGACT TCCGTACCGA AGTGCTTGGC TTAGTGAAAG CGCAACAAGT GAAAAACACC
GTTATTGTGC CTGTGGGGGC AAAAGGTGGT TTCGTTTGTA AACAACTGCC AACTGAAGGT
GGTCGTGAGG CTTTCTTCAC CGAAGGCCAA GAATGTTACC GCATCTTCAT TCGCGCCTTG
CTCGATATTA CCGATAACAT TTTGAACGGT GAAATCGTGC ATCCAGTGGA TGTGGTTCGT
CACGATGAGG ATGACCCTTA TTTAGTTGTG GCTGCCGATA AAGGTACTGC GACCTTCTCT
GATATCGCGA ACTCGATTTC TCTCGAATAC AATTTCTGGT TAGGTGATGC GTTCGCATCG
GGTGGTAGTA ACGGTTACGA TCACAAGAAA ATGGGTATCA CAGCCAAAGG TGGCTGGGAA
TCTGTTAAGC GCCACTTCCG CGAAGTGGGT ATTGATTGTC AAACCACTGA CTTTACCTGT
TTAGGTATTG GTGACATGGC GGGTGACGTA TTCGGTAACG GTATGTTGTT GTCTAAGCAC
ACAAAACTTG TTGCTGCATT CAACCACATG CATATCTTTA TCGATCCAAA TCCTGATGCT
GCTACCAGTT ATGAAGAACG TGCTCGTTTA TTCGCGCTGC CACGTTCGAG CTGGGAAGAC
TACAATAGCA AGCTGATTTC TAAGGGCGGC GGTGTTTTCC TGCGTTCATC TAAGTCAATT
CCATTGTCTG CTGAAATGAA GCAAATGTTG GGTACTGAGA AAATCTCGAT GACCCCAACT
GAGATGATGA AAGAACTGCT GAAAATGCCA GTTGATCTGA TTTGGAACGG TGGTATTGGT
ACCTACGTTA AGTCTTCACG GGAAACCAAT GCCGAAGTCG GTGACCGCGC TAACGATGCA
CTGCGCGTCA ATGGCCGTGA ACTGCGTGCT AAGATCGTCG GTGAGGGTGG TAACTTAGGT
TGTACCCAAT TAGGTCGTAT CGAATATGCT GCTAATGGCG GCCGTATTAA CACTGACTTC
GTGGATAACG TTGGTGGTGT GGACTGTTCT GATAACGAAG TTAACATCAA GATTTTGCTG
AACGCGATGG TGACTGAAGG TGAACTGACG TTGAAACAAC GTAACCGTTT ACTTGGAGAG
ATGACCGAAG AAGTCGGCGA AATTGTTCTG CAAGACTGTA AAGACCAAAC CCGCACGATT
TCTGTTACCC AAGTGCGTGG TGCTGAACAG TTAAAAGAGC AAATCCGCTT CATCCAGTAT
CTGGAGAAAG AAGGTAAGTT AGACCGCGCG TTAGAATTCT TACCCTCGGA AGAAGAACTG
ACAGAACGTC TCGCCAATGG CCGTGCATTA ACGCGTCCAG AGCTATCAGT CTTGGTTGCT
TACGCTAAGA TGGTGCTCAA AGAGCAGTTA CTGACGCCAG AAATCACTGA AGATACGCTG
CTGAGCCAAT TGTTGATTGC TTACTTCCCG AAAAAACTTC AGGAACTGTA TAGCGCCAGA
ATGGTTACGC ATCCACTGCG TGGTGAAATC ATTGCTACCT CACTGGCCAA CGAACTGGTC
AATGACATGG GTCTGAACTT TGTTCAACGT ATGCAAGATG AGACTGGTGC CTCAGTTGCT
GATGCGGCAA TTTGCTACAC TATGGCTCGC GAAGTCTTTG GTTTAGCTGA ATTAACTAAA
TCGATCACTG ACTTAAACGG TATTGTACCT GCTGTGGTTC AGGGTGAAAT GTTGCACCAG
TTACGTCGTA ATATGCGTCG TGCATGTCGC TGGTTCTTGC GTCACCGTAA CCGTAGTTGG
AGTATTGAGC AAACAGTTGC CTTCTTCAAA CCGGTATTTG AACAACTCAA AGCGAATGTT
CATTCATACT TAGCTGAAGA AGAAGCAGCA GGCATCCAGG CTGAGATCAA TGCTCTGATT
AAAGAGAATG TGCCTCAGGA TGTTGCCTCT ACCGTTGCCA ATATGAGCAC ACTGTTCTCT
ACGCTTGATA TTGCGCAAAT TGCGCAGGCT GAAGAGAAGA CTGTCGCGCT TGTTGCCGAG
ACTTATTTCA AACTCGGTGC TCGCGTTGAG CTGCACTGGT TCCTAGAACA AATCAGTGCG
CAACCAGTGA CTAACCATTG GCAAGCACTG GCCCGTGCGG CCTTTAGAGA AGAGCTGGAT
TGGCAGCAAC GTGCGTTAAC GTCAGTGGTT TTAAGAACGT GCAGTGCAAC CTGTAATGCA
CAGAGTGTTA TTTCCCTGTG GATTGAGACT AATCAAGCCC TGTTGGAAAG ATGGTTCCAC
ATGCTAGCTG ACTTTAAAAC GTCGCAAAAT CATGAGTTTG CTAAGTTCTC TGTCGCCCTA
CGTGAACTTA ACCTTCTGAT CCTTCACTGT GAAGGGCAAA AGTAA
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| Protein sequence | MALKDAMPSV LLENVVSLIH AKVPNSQAKQ VEQFATCLYA HMSKDDLNAR NDSDLYGAVL
SLWNALNKTP KGETHLRVFN PSQSKHGWQS THSIIEVIQP DMPFLVDSVG MALNRMGITA
HVMLHTPLAI ERSAQEVTKV TYLNQSPDST EHVAVFLIEI DRQSSTADIK ALEREIQSVL
ADVAASVNDW GAMSAKLSET IKELPKRPFP GEKQELEEAI NFLTYLNNHH FTLLGYRQYD
LKRVEGDVEL VPNIASSLGL MNKHHKTQPE QGLLLSSFSD SARKEALDHS LLILTKSSAK
SRVHRPAYVD YIGIKRFDKK GNVIGEDRFI GLYASNVYNR SPREIPLLNE KVQRVLDRSG
LTPRSHDYKA LLNILENLPR DELIQANVDD LAHTAHGVLE MQDRDKLKLF VRKDGFGRFL
SCLVYVSKDR YNTKLRQDTQ RILAQHFNSK EDVEFTTYFS ESTLARTHYI VKVDNNNMDV
DVAAIENNLI EAARSWEDKL NTALNNALGE EAGTHLMKRY ANAFEQSYKE DVLPSSAVVD
MQQLEALDDE HKLGMLFYQP QEAALNDNKV RLKLFHKDEP IHLSDVLPML ENFGLRVINE
RPYEVTTADG STFWILDFLM TVKVVNTDNI ADSQDRFQTA LSQVWQKKLE DDGFNRIILA
SGLTGREVSV LRAYAKYMRQ IDATFSQAYI EETFGRYPQI ADLLVKMFIR KFNPKLKTRT
LGKFMEQINL RLDEVSSLDD DRIIRRYLDL INATLRTNFY QLDAKGESKS YISFKFMPSL
IPEMPRPLPK FEIFVYSPRV EGVHLRYGKV ARGGLRWSDR REDFRTEVLG LVKAQQVKNT
VIVPVGAKGG FVCKQLPTEG GREAFFTEGQ ECYRIFIRAL LDITDNILNG EIVHPVDVVR
HDEDDPYLVV AADKGTATFS DIANSISLEY NFWLGDAFAS GGSNGYDHKK MGITAKGGWE
SVKRHFREVG IDCQTTDFTC LGIGDMAGDV FGNGMLLSKH TKLVAAFNHM HIFIDPNPDA
ATSYEERARL FALPRSSWED YNSKLISKGG GVFLRSSKSI PLSAEMKQML GTEKISMTPT
EMMKELLKMP VDLIWNGGIG TYVKSSRETN AEVGDRANDA LRVNGRELRA KIVGEGGNLG
CTQLGRIEYA ANGGRINTDF VDNVGGVDCS DNEVNIKILL NAMVTEGELT LKQRNRLLGE
MTEEVGEIVL QDCKDQTRTI SVTQVRGAEQ LKEQIRFIQY LEKEGKLDRA LEFLPSEEEL
TERLANGRAL TRPELSVLVA YAKMVLKEQL LTPEITEDTL LSQLLIAYFP KKLQELYSAR
MVTHPLRGEI IATSLANELV NDMGLNFVQR MQDETGASVA DAAICYTMAR EVFGLAELTK
SITDLNGIVP AVVQGEMLHQ LRRNMRRACR WFLRHRNRSW SIEQTVAFFK PVFEQLKANV
HSYLAEEEAA GIQAEINALI KENVPQDVAS TVANMSTLFS TLDIAQIAQA EEKTVALVAE
TYFKLGARVE LHWFLEQISA QPVTNHWQAL ARAAFREELD WQQRALTSVV LRTCSATCNA
QSVISLWIET NQALLERWFH MLADFKTSQN HEFAKFSVAL RELNLLILHC EGQK
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