Gene SO_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2592 
SymbolpyrD 
ID1170294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2719790 
End bp2720809 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content40% 
IMG OID637344420 
Productdihydroorotate dehydrogenase 2 
Protein accessionNP_718178 
Protein GI24374135 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATA AAATCGCACA GAAAGTCATG TTTCAGATGG ATCCTGAGCG AGCGCATAAT 
TTAGCCATTG GCAGTCTGAG AATGACAGGC AACGGTCCTC TCAATGCTTT TTATGCTCAG 
AATATTACGC CAGCGCCTGT CAGCTTTATG GGACTGACTT TTCCAAATCC AGTGGGCTTA 
GCTGCAGGTA TGGATAAAGA TGGCGAGTCG ATAGATGCCT TTCATGCGAT GGGATTTGGT 
CATGTGGAAG TGGGAACGGT TACCCCAAGA CCACAACCTG GTAATGATTT ACCGCGTTTA 
TTTAGATTAA AACCCGCCAA GGCGATTATC AATCGCATGG GATTTAATAA CAAAGGTGTC 
GATAACCTAG TCAAAAATTT GATCGCGAAA AAGACTGATA TTATGGTTGG CGTCAATATT 
GGTAAAAATA AAGACACCCC AGTAGAACAA GGTAAAGACG ATTATTTAAT CTGTATGGAT 
AAAGTTTATC TCCATGCGGC TTATATTGCG GTGAATATTT CATCACCTAA TACCCCTGGA 
TTACGATCGC TGCAATATGG CGATCTATTA GACGAATTAT TAAGTGCCAT TAAAGCCAAG 
CAACTTGAAT TGGCCGACAA ACATAAAAAA TATGTACCTA TCGCGCTTAA AATTGCCCCT 
GATTTAACGA TTGAAGAAAT CGAAAATATT GCTCAAGCGT TGATTAAAAA TCAGTTTGAT 
GGTGCAATTG CGACCAATAC CACCTTGACC CGTGACGGTG TTAGTGGGCT TGCCAATGCG 
AATGAAAGCG GTGGCTTAAG TGGTAAACCT TTAACTGAAC TTTCAACAAA AGTGATTAAA 
CAATTAGCCA CTTGTTTACA AGGTCAAATT CCAATTATAG GCGTGGGTGG CATTAATAGT 
GCTGAAGATG CATTAGCGAA GTTTGATGCG GGCGCAACTA TGGTGCAGAT TTACTCGGGT 
TTTATTTATC AAGGTCCGAA GTTAATTAAA GAGATTGTTG AAGCTTACCG TTTAAAATAA
 
Protein sequence
MFYKIAQKVM FQMDPERAHN LAIGSLRMTG NGPLNAFYAQ NITPAPVSFM GLTFPNPVGL 
AAGMDKDGES IDAFHAMGFG HVEVGTVTPR PQPGNDLPRL FRLKPAKAII NRMGFNNKGV 
DNLVKNLIAK KTDIMVGVNI GKNKDTPVEQ GKDDYLICMD KVYLHAAYIA VNISSPNTPG 
LRSLQYGDLL DELLSAIKAK QLELADKHKK YVPIALKIAP DLTIEEIENI AQALIKNQFD 
GAIATNTTLT RDGVSGLANA NESGGLSGKP LTELSTKVIK QLATCLQGQI PIIGVGGINS 
AEDALAKFDA GATMVQIYSG FIYQGPKLIK EIVEAYRLK