Gene SO_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2582 
Symbol 
ID1170284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2709757 
End bp2710623 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID637344410 
Productalpha/beta fold family hydrolase 
Protein accessionNP_718168 
Protein GI24374125 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAAT CTTTCGCCCC CCAAAATCAA GTCCAGTTTG TGTTACCCCA TATCAAGCTG 
AGTGGTCGAT TATGGGGGAC GAAAGATAAG CCGTTAATAC TCGCGTTGCA TGGGTGGTTA
GACAATGCCA ACAGTTTCGA ACCGCTCGCG GACTATTTAT CTGATTATCA AATACTTGCT
ATAGATTGGC CTGGTCATGG TTTTTCTGCG CATCGCCCAG GGCATTACCC ATTGCATTGG
ATTGACTATT TATACGATCT TGATGCGTTA TTGGCTGTTT TACCACAAAA GCCACAGGCT
ATTATGGGGC ATTCGTTAGG GGGAATTGTC GCCTCCGCGT ATACAGCAGC GTTTCCTGAA
AAGGTAAACA AACTGATTTT AATTGAAGCC TTAAGCCCCT TGTTTGAGTC AGCGTCTCAA
GCAAAATCAC GGTTGAGGAA AAGCTTTTAT CAACATGAGA AGTTTTTAGC ACAAAAGCAT
AAGCAGATCA GAGGTTACGA TAGTATCAAT ACCGCGGTTA AGGCCAGAGT GCACTTAACT
GGATTGGCCG AGCCTTGGTG CCGCCTGCTA CTCGAACGCA ATATGCAAGC AACTTCTGAT
GGAGTTGTTT GGCGCAGTGA CCCAAGATTA CGACTCGATT CGCCAATGCG ACTGACCTTT
GAGCAGGTCG ATGCCCTTAT GCAGAATATT CCAGTGTCAA CCTTGCTCAT CTGCGGCAAA
CAAGGCTTTA GCCAATTGCA TGCTGCACTG CCTAAGGCTA GGAAATGGTT CAGCAATTTA
TCTGAGCATA TGCTCGAGGG TGACCATCAT GTACATATGG ATAACGCACA AGCAGTCGGA
CAATTAATCC AGCGTTTTGT CGATTAA
 
Protein sequence
MWQSFAPQNQ VQFVLPHIKL SGRLWGTKDK PLILALHGWL DNANSFEPLA DYLSDYQILA 
IDWPGHGFSA HRPGHYPLHW IDYLYDLDAL LAVLPQKPQA IMGHSLGGIV ASAYTAAFPE
KVNKLILIEA LSPLFESASQ AKSRLRKSFY QHEKFLAQKH KQIRGYDSIN TAVKARVHLT
GLAEPWCRLL LERNMQATSD GVVWRSDPRL RLDSPMRLTF EQVDALMQNI PVSTLLICGK
QGFSQLHAAL PKARKWFSNL SEHMLEGDHH VHMDNAQAVG QLIQRFVD