| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2580 |
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| Symbol | rnd |
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| ID | 1170282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2706706 |
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| End bp | 2707809 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344408 |
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| Product | ribonuclease D |
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| Protein accession | NP_718166 |
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| Protein GI | 24374123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTCAGT ATGTGAGTGA CGAAGCGAGC CTCAATGCCC TCGTCGCTCA ATATCAACAA
AGTCCGCTAC TTGTGTTAGA TACCGAGTTT GTGCGCACTC GTACTTATTA CGCTAAGCTT
GGCCTCATTC AAGCTTATGA TGGTAAAACC TTAGCCTTGA TTGACCCTAT TGCTTTGCCC
GATCTCAGTG CATTTTGGGC TTTGCTGGAT AATCCGAATA TTATCAAACT GGTGCATTCC
TGTAGTGAGG ATTTAGAAGT GTTTGCCCAC TATGGCCAGC GCCAACCTAC TCCCTTATTT
GATAGCCAAA TCGCCGCTTC GCTATGTGGT ATGGGTCATG GCTTAGGTTA TGCCAAGTTA
GTTGAAACTT GCTTAGGTGA AGTGATTGAT AAGGGCGAGT CGCGTACCGA CTGGATGCGC
CGCCCTTTGA CCGATGCCCA GCTCAGTTAT GCGGCAAATG ATGTGTTATA CCTGTACCAA
CTTTATCCGC AATTAGCTGA AAAGCTTCAA ACTCAGGACC GCTTAGACTG GCTCTATGAA
GAAGGCGAGC GGATGACCGA AGGGCGTTTA GCCTCGCCTG ATGCCGAAAC TGCATACCTT
AAGGTGAAAA ATGCCTTTCA GCTCACCGAG CATCAATTGG CTTACCTTAA AGTGTTAGCC
AAATGGCGCT TAGAAAAAGC CTTAGCGCGG GATTTAGCCT TAGGCTTTGT GATTAAAGAT
CATGGTTTGA TTGCGCTAGC GAAAAAACAA CCTAAGAGCA TGAGTGATTT GCTCAAACTG
AACGATTTGA CCGAGCAGGA AAAGCGCATC CACGGTAAAG ATATTTTACG GGTAATGCAG
ACTGCCGACT TAAGTAATCC ACCAGAGTTA GTTGATGTAT TGGCGCTTAA ACCCGGTTAT
AAATCAGCCT TTAAGACCAT TAAAACCAGT TTAACAGAAC TCTGTGAGCA ACATGCCATT
CTGATGGAAA TGTTAGGTTC AAAGCGTCAT ATTCATGAGT ATTTACAATG GCGTTGGGAT
AAACAGCAAG GGGAATTGCC GACAGTATTA AGCGGTTGGC GCGGGGAGAT TGCGGCCGAG
TCATTGGCAA AACTTGAGGT CTAA
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| Protein sequence | MFQYVSDEAS LNALVAQYQQ SPLLVLDTEF VRTRTYYAKL GLIQAYDGKT LALIDPIALP
DLSAFWALLD NPNIIKLVHS CSEDLEVFAH YGQRQPTPLF DSQIAASLCG MGHGLGYAKL
VETCLGEVID KGESRTDWMR RPLTDAQLSY AANDVLYLYQ LYPQLAEKLQ TQDRLDWLYE
EGERMTEGRL ASPDAETAYL KVKNAFQLTE HQLAYLKVLA KWRLEKALAR DLALGFVIKD
HGLIALAKKQ PKSMSDLLKL NDLTEQEKRI HGKDILRVMQ TADLSNPPEL VDVLALKPGY
KSAFKTIKTS LTELCEQHAI LMEMLGSKRH IHEYLQWRWD KQQGELPTVL SGWRGEIAAE
SLAKLEV
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