Gene SO_2572 details

Gene Information

• Locus tag: SO_2572
• Symbol: ppiB-2
• ID: 1170276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2702786
• End bp: 2703280
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637344402
• Product: peptidyl-prolyl cis-trans isomerase B
• Protein accession: NP_718158
• Protein GI: 24374115
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATTT TCACAACAAA CTTTGGTGAT ATCAGTATCG AACTTGATGT TGAGCACGCC 
CCTGTGACCG CCAAAAACTT TATGCGTTAC TGCAAAGAAG GTTTTTATGA ACACACGATT 
TTTCACCGTG TGATCAAAGG CTTTATGATC CAAGGTGGTG GCTTTACCGC TAAAATGAAA 
GAAAAACCCA CCCACGAGCC AATTGTTAAC GAAGCTAACA AAGGGTTATC AAACGTCTTT 
GGTACAATTG CCATGGCGCG CACAGATGCG CCGCATTCAG CTACTGCGCA ATTTTTTATC 
AATACCGCTA ACAATGAATT CCTCGACCAT ACGGCAACCA CCAATAACGG TTGGGGTTAT 
GCGGTATTTG GTAAGGTGAC CGCGGGACTT GAAGTGATTT TAAAAATTGA AGAGGTGAAG 
ACAACGCGAG TAGCAGGTCA TGAAGATGTG CCCCGTGAGC CTATCATTAT CGAAAAAGTG 
ACGATTATTG AATGA 

 

Protein sequence

MIIFTTNFGD ISIELDVEHA PVTAKNFMRY CKEGFYEHTI FHRVIKGFMI QGGGFTAKMK 
EKPTHEPIVN EANKGLSNVF GTIAMARTDA PHSATAQFFI NTANNEFLDH TATTNNGWGY 
AVFGKVTAGL EVILKIEEVK TTRVAGHEDV PREPIIIEKV TIIE