Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2571 |
Symbol | |
ID | 1170275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2701334 |
End bp | 2702761 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344401 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | NP_718157 |
Protein GI | 24374114 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTCT CCCAACTTGG ATTACACAGC GCGCTTGTTA AAGCCGTGAC TGAACTGGGT TACCAAAGCC CTACGCCAAT TCAAACTCAA GCCATTCCTA GCATTCTGGC GGGGAAAAAT GTGCTGGCCG CCGCCCAAAC CGGTACGGGT AAAACCGCGA GTTTTGTATT GCCGTTACTG CATCGATTTG CTGACGCCCC CAAAATTCGG CCTAAACGGG TGCGCTCCAT CATCCTTACC CCCACACGGG AACTGGCGCT GCAGGTTGAA CAAAACATCA ATCAATATGC CAAATACCTG CCGTTAACGG CCATGGCCAT GTACGGCGGC GTTGATGCTG CGCCGCAAAA AAAACGTCTG ATTGAAGGGG TTGATCTGCT CGTTGCAACG CCTGGGCGTT TGCTGGATAT GTATACTCAA AGAGCCATTC GCTTTGATGA AGTCTCCGTA TTAGTGCTGG ATGAAGCCGA TCGCATGCTA GATATGGGTT TTATCGAAGA TATTAATAAC ATTATTGAAA AGCTGCCTGA GCAGCGGCAA AACCTGTTAT TTTCGGCAAC CTTATCAAAA CAGGTCAAAG CACTGGCTAA AACCGCTATT CCGGATGCCA TTGAGATTGA AATCAGTCGT AAAAATGCCG CTTCAACGCA AATTGATCAG TGGTTAACGA CTGTCGATAA AGATCGAAAA TCAGCGCTAT TAAGCCATTT AATTAAAGAG AATAACTGGG CGCAGGCATT AATCTTTATC CAAACCAAAC ATGGTGCAGC CAAGCTGGTT AGCCAATTAG AAAAGCGTGG CATTGTTGCC GAAGCCTTCC ACAGTGGTCG TAGCCAAGCG ATTCGCGAAC AACTGCTAAT CGATTTTAAA GCAGGTAAAG TGCCCTTTTT AGTCGCTACA GGTGTTGTGT CACGCGGTAT CGATATCGAT GCGCTCGAGC GGGTGATTAA CTACGATTTA CCCGATGAGG CCGATGATTA TATCCATCGC ATTGGCCGCA CCGGACGTGC CGGCAATCAA GGTGAAGCCA TATCCTTTGT CTCTAAGGAC GATTTTAGAA ATCTATGCGC CATTGAGCGC CGTTTAGGTC ATATTATCGA GCGCAAGAAC ATCGAGGGGT TTGAACCTAA AAAAGCGGTG CCTATTTCAA TACTCGATTT TGTGCCTAAA TCAGCCTCAA GATCAGCGCA TAAGCCCAAC AATACTGCGG CGGTAAAAGA TCAAGCATCG CCCTATTCCA GTGGGAAACC CGGCACCTTT GAGGCAACTC AGGCTAAAAA GCACCGCAGT GCCAAAGCTA AGCCGCAATC CAAACAAGTG GCAAGGTTAA CACCACCTCC AGTAAACGAA AGATCGGAAG CGCAGCGCAC ACAAGGTGAA ACATCGCAAC CTTTTAATCC TTGGCACAGT GGGCCAAAAA CCAAATAA
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Protein sequence | MPFSQLGLHS ALVKAVTELG YQSPTPIQTQ AIPSILAGKN VLAAAQTGTG KTASFVLPLL HRFADAPKIR PKRVRSIILT PTRELALQVE QNINQYAKYL PLTAMAMYGG VDAAPQKKRL IEGVDLLVAT PGRLLDMYTQ RAIRFDEVSV LVLDEADRML DMGFIEDINN IIEKLPEQRQ NLLFSATLSK QVKALAKTAI PDAIEIEISR KNAASTQIDQ WLTTVDKDRK SALLSHLIKE NNWAQALIFI QTKHGAAKLV SQLEKRGIVA EAFHSGRSQA IREQLLIDFK AGKVPFLVAT GVVSRGIDID ALERVINYDL PDEADDYIHR IGRTGRAGNQ GEAISFVSKD DFRNLCAIER RLGHIIERKN IEGFEPKKAV PISILDFVPK SASRSAHKPN NTAAVKDQAS PYSSGKPGTF EATQAKKHRS AKAKPQSKQV ARLTPPPVNE RSEAQRTQGE TSQPFNPWHS GPKTK
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