| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2564 |
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| Symbol | |
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| ID | 1170269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2693552 |
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| End bp | 2695099 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344395 |
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| Product | Slt family transglycosylase |
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| Protein accession | NP_718150 |
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| Protein GI | 24374107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTAT CACTTTATGT TGTAGTAGGG GGATTTGCCC TACTCACGGG TTGCCAGACG
TTAGACAACC ATCAGGTGAC CAAACCTGAA GCACAAACCG TCACGACCGA AAATACCGTC
CCACAGTATT ATCTCGCAAC CGAACCTGAA TCGGCGCAAG TGACTGATGT GTGGGAGCGA
ATTCGTCAAG GAATGCAGCT ACCTGTTCCT GACAAAAAAC TCGTTAACTA TTATCGCGAT
TGGTACATTA ACAACCCTAA ACACCTCGAA GTGATTTCTG AGCGTGCGGC GCCTTACATG
TATTTGATCG TCGAAGAGCT TGAGAAACGG CATTTACCGA TCGAGATAGC TCTGCTACCG
ATTATTGAAA GTGCCTTCGA TCCGAGCGCC TCATCAGCCA GTGCTGCATC TGGTCTTTGG
CAATTTACCA CGCCCATGGC GAGTCATTTT GGTTTAGAAA TGAACTGGTG GTACGACGGT
CGTCGCGATG TACCCGCATC TACCACAGCC GCCTTGGATA TGCTCGAATA TTTGTACAAT
AAAACCAATA ATAATTGGCT TTATGCGATT GCAGCTTATA ATACGGGTGA GTCAAAGGTA
CTCAATGCGA TTAAACGCAA TGAAGATAAA GGCCTTAAAA CTGATTTCTG GTCACTCGAT
CTCCCTAAAG AAACGAAACG CTATGTGCCA CAGTTATTAG CCCTAGCTGA AGTGATCAAA
CATGCCGATG AATATGGCAT CACTTTGGCA CCGATCAATA ACAGCCCTTC TATCGAAGTT
GTTGATATTG ATAGTCAAAT TGACTTAGCT ATGGCAGCAG GTCTCGCCAA TATGACCACC
ACTGAGCTAG CAAAGCTCAA CCCTGGTTAT AACCGTTGGG CAACCTCACC ATTGGGACCG
CACACATTAG TTTTACCCAT TGATAAATCA GAAGAGTTTA AAAAAGCACT CGCAGAAACC
GAAAGCGAAG CTCGAGTAAG CTGGCTTAGA TACACCATAA AATCCGGTGA CAGTATCGGT
TCAATTGCCC AAAAACATCA TACAACAGTG AATGCGATCC GCGCTGCTAA TGGTATGAAA
AGCAACAATA TCGTTGCTGG AAGACACCTC ATTATCCCAG TCTCCGCTGA CGATAAGCAG
CTCTATGCTC TGTCAACCAG TCAAAAATTA CCTAAAAAAG CTGCAGGTGC AACCTCGGGT
AATAAGCTGA CCTATCAAGT GAAATCTGGT GATTCTCTGT GGCAAATTGC CCAAGCTCAT
AATGTGAGCG TCAAACAGTT AACTGCTTGG AACCATTTAA GCAAAGACAG CAAATTGCAA
ACGGGTCAAA AACTGACCAT TGTTGCACCA CAGGAAAAAC TCGATAGCGA GCATATCCGT
ACCGTTAGCT ACAAAGTGAA GTCTGGTGAT TCACTTGCTC AAATTGCTAG CAAATTTAAG
GTGACCGTGG CTGAACTCCT AGAATGGAAC AGCTTAACGC CCTCACAATA CATTCTACCC
GGCCAAGTAT TAAAGTTGGT TGTGGATGAA AGCAATCTAA ATGCTTAA
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| Protein sequence | MRVSLYVVVG GFALLTGCQT LDNHQVTKPE AQTVTTENTV PQYYLATEPE SAQVTDVWER
IRQGMQLPVP DKKLVNYYRD WYINNPKHLE VISERAAPYM YLIVEELEKR HLPIEIALLP
IIESAFDPSA SSASAASGLW QFTTPMASHF GLEMNWWYDG RRDVPASTTA ALDMLEYLYN
KTNNNWLYAI AAYNTGESKV LNAIKRNEDK GLKTDFWSLD LPKETKRYVP QLLALAEVIK
HADEYGITLA PINNSPSIEV VDIDSQIDLA MAAGLANMTT TELAKLNPGY NRWATSPLGP
HTLVLPIDKS EEFKKALAET ESEARVSWLR YTIKSGDSIG SIAQKHHTTV NAIRAANGMK
SNNIVAGRHL IIPVSADDKQ LYALSTSQKL PKKAAGATSG NKLTYQVKSG DSLWQIAQAH
NVSVKQLTAW NHLSKDSKLQ TGQKLTIVAP QEKLDSEHIR TVSYKVKSGD SLAQIASKFK
VTVAELLEWN SLTPSQYILP GQVLKLVVDE SNLNA
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