| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2562 |
|---|
| Symbol | |
|---|
| ID | 1170267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2691603 |
|---|
| End bp | 2692337 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637344393 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_718148 |
|---|
| Protein GI | 24374105 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGTATA ACAGTACTGT GCGCAAACCT GAGCAATGGG AAGATTTGCC CAATGGCTGT
GCACTCCAGC AAGCTGTTGC CGATAAACTC GCCGATTGGT GGCCAAGGGT TTTTGGTTAT
CATTTGTTGA AGTTCGGCCC CCTAAGTGCT GAGATTTCAA GTATGGCGTC ACCTGTTGCC
CATCATTTTT CTTTATGTTC AGCTCCTAAT GCTTCGTTAA TGGGGGATTT CTGCCATTTG
CCCTTACAAA ATGGGGTGAT TGATGCTGTG GTTATGAGCC TATTGTTGGA ATTTGAGGCC
GATCCTTACA GGATACTGCG TGAAATTGAC CGAGTGTTGA TTGCGGGAGG TTACCTGTTT
ATTGTTGGCT TTAACCCCTT GAGCCCTGTG TTCCTTGGGA AATTATGGCC AAAATATCAA
GATGATCTGC CCTGGTGTGG GCGTTTTTTT ATGCCATCTC GGGTGCGAGA TTGGTTAGGG
CTACTCGGAT ATCAAGTGGT GAGTGATGAG CGTTTGATTT ACCACCCACT GATAGGCGAA
TTGAATAGTG GCCGTTTTTT GCAGCACACC TTAGCTTCAT GGCTCCCCAG TGCGGGTAGT
TTGTATTTGA TTGTGGCACG TAAATTAGAG TCCCCATTAA CACCAATCCG CGACAAACGT
AAGGTTCGAC AACCTAATTG GGCCACCGCG CCAACTGCTG GACGCACGGG GCATTTATCT
GAACCTACAA AATAA
|
|---|
| Protein sequence | MSYNSTVRKP EQWEDLPNGC ALQQAVADKL ADWWPRVFGY HLLKFGPLSA EISSMASPVA
HHFSLCSAPN ASLMGDFCHL PLQNGVIDAV VMSLLLEFEA DPYRILREID RVLIAGGYLF
IVGFNPLSPV FLGKLWPKYQ DDLPWCGRFF MPSRVRDWLG LLGYQVVSDE RLIYHPLIGE
LNSGRFLQHT LASWLPSAGS LYLIVARKLE SPLTPIRDKR KVRQPNWATA PTAGRTGHLS
EPTK
|
|---|
| |