| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2559 |
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| Symbol | dnaQ-2 |
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| ID | 1170264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2689376 |
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| End bp | 2690104 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344390 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | NP_718145 |
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| Protein GI | 24374102 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTA TCTCAAACGC AAGCCGTCAG GTTATTTTAG ATACTGAAAC CACGGGTATG
AACCAAGGCA GTGGTGCGGT GTATTTAGGG CACAGAATTA TTGAGATAGG TTGTGTTGAG
GTCATCAACC GCCGTTTAAC GGGCCGTTAT TATCACCAGT ATATAAATCC CGGCCAAGCG
ATTGATCCAG AAGCGATCGC GGTTCATGGG ATCACCGATG AACGTGTTGC GAATGAGCCA
AGATTCCATC AAATCGCCCA AGAGTTTATC GATTTTATCA GTGGCGCCGA AATTGTGGCC
CATAACGCAA ACTTCGACGT GAGCTTTATG GACCATGAGT TTTCCTTACT GCAGCCCTTA
GGGCCAAAGA CTCGCGACAT TTGTGAGATT TTAGACTCCC TCGACATTGC TAAGTTTTTG
CACCCCGGAC AAAAGAACAA CTTAGACGCA CTCTGTAAAC GTTATGGCAT CGACAACTCT
CGTCGCCATT ACCATGGCGC ATTACTCGAC GCCGAAATCC TTGCCGATGT CTATTTATCG
ATGACGGGTG GGCAGACTAA GTTTAATCTC TCTAACGAAG AAGTCGGTCA AGAGGGGGGC
GGCATTCAAC GCTTTGATCC CACATCACTT AATCTTAAAG TGATCTGCGC ATCGGCCGAT
GAACTCGTTA TGCATGAAAA GCGCCTTGAT TTAGTCGCAA AATCAGGAAA ATGCCTCTGG
AGAGGATAA
|
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| Protein sequence | MNIISNASRQ VILDTETTGM NQGSGAVYLG HRIIEIGCVE VINRRLTGRY YHQYINPGQA
IDPEAIAVHG ITDERVANEP RFHQIAQEFI DFISGAEIVA HNANFDVSFM DHEFSLLQPL
GPKTRDICEI LDSLDIAKFL HPGQKNNLDA LCKRYGIDNS RRHYHGALLD AEILADVYLS
MTGGQTKFNL SNEEVGQEGG GIQRFDPTSL NLKVICASAD ELVMHEKRLD LVAKSGKCLW
RG
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