Gene SO_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2549 
Symbol 
ID1170255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2682124 
End bp2682465 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content40% 
IMG OID637344379 
Producthypothetical protein 
Protein accessionNP_718135 
Protein GI24374092 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TTAAAGTGCT GAGCATATTC CAGCTTACTC TTGGGCTCGT AGTCGTAGCC 
AGTTGTAGTC CCAGTTACAA CAAAGAAGGT ACTGGTGAGT ATTTCGACGA CAGCGTGGTT
ACGGCTAACG TTAAAGCAGC AATTCTAAGT GAAAAAAGCT TAAGCGTAGC TGAGATTAAT
GTTGAAACAT TCAAAGGCGT GGTTCAGCTA AGCGGCTTTG TCAAATTACG TGAAAATATT
AATACTGCAG TCAAATTAAC GGCCAAAGTT CCTGGTGTTA TTTCAGTCAA AAACGATAAG
CAGCTAAATA TAGCACTTCG TTGTATTCGA ATAAGCAGCT AA
 
Protein sequence
MKTIKVLSIF QLTLGLVVVA SCSPSYNKEG TGEYFDDSVV TANVKAAILS EKSLSVAEIN 
VETFKGVVQL SGFVKLRENI NTAVKLTAKV PGVISVKNDK QLNIALRCIR ISS