| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2536 |
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| Symbol | fadE |
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| ID | 1170243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2663387 |
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| End bp | 2665834 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344367 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | NP_718122 |
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| Protein GI | 24374079 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTACCC TACTTTGGCT CATCGCCATG ATATTAGTGC TAGGAGCCCT AGCTTACCTT
CGGGTATCTT TGCTCACTGC CACTATTGCA CCCGCTGTTG TGATGACAGC CGGATGGACA
CTCGATGTTG TCGGCCCTAT CTCTTGGATT ATCTTCCTTG TGATCGCGCT GCCGCTCAAT
ATTAGTGCTT TTAGACAAAA TGTAATCAGT CGCCCTCTGA TGAAGGTATA CCGTGGCATC
ATGCCCGAAA TGTCTTCTAC CGAAAAAGAA GCGATTGAAG CAGGTACTAC TTGGTGGGAA
GCGGATCTGT TTGCGGGGAA CCCAAACTGG AAAAAACTGC ACAACTACCC AGTCGCTCGC
TTAAGTGCCG ATGAACAAGC CTTCTTAGAT GGTCCCGTTG AAGAAGTGTG CCGCATGGTG
AATCAACACC AAGTGTCACA CCAACTGGCT GATTTGCCTG CTGAAGTTTG GCAATATTTG
AAAGATCATG GCTTCTTCGC GATGATCATT AAGAAAAAGT ACGGCGGTTT AGAGTATTCT
GCCTACGCCC AGTCCCGCGT GCTGCAAAAG CTGGCGGGTT TAAGCAGTGA ATTAGCCTCG
ACTGTTGGCG TTCCTAACTC TTTAGGCCCT GGTGAGCTGC TGCAACACTA TGGTACACCA
GAGCAACAAA ATTATTATTT ACCCCGTTTA GCCAAAGGTT TAGAAGTTCC CTGTTTCGCC
CTCACCAGTC CTGAGGCCGG TAGCGATGCG GGTTCTATCC CTGACTTTGG TATCGTGTGT
AAAGGCCAAT GGGAAGGTGA AGAAGTTCTG GGGATGAAAT TAACGTGGAA CAAGCGTTAC
ATCACCCTCG CCCCTGTTGC GACTGTATTG GGTCTGGCGT TTAAATTGCG CGACCCTGAT
CATTTATTAG GTGATAAAGA AGAGCTGGGG ATTACCTGTG CGCTGATCCC AACGGATGTA
GAAGGTGTTG AAACCGGTCG TCGCCACTTC CCGCTGAACT GTATGTTCCA AAACGGTCCA
ACCCGCGGTA AAGACGTATT CGTACCTTTA AGCTTTATCA TCGGCGGCCC GAAAATGGCA
GGCCAAGGCT GGCGCATGCT GGTTGAATGT TTGTCTGTAG GTCGTGGTAT TACTCTGCCA
TCAAACTCTG CCGGTGGCGT GAAAACCGCA GCTTTGGCAA CGGGTGCTTA TGCGCGTATT
CGTCGTCAAT TCAAACTACC AATTGGTAAG TTAGAAGGGA TTGAAGAGCC AATGGCACGC
ATCGGTGGTA ACGCCTACCT AATGGATGCA GTGACCTCAT TAACCACCAC GGGTATCGAC
TTAGGAGAAA AACCTTCTGT CATCTCCGCT ATCGTGAAAT ATCACCTGAC CGATCGTATG
CAGAAATGCG TTATCGACGC CATGGATATT CATGGTGGTA AAGGTGTGTG CTTAGGCCCT
AACAACTACT TAGGTCGTGG CTACCAAGCG GCGCCAATTG CGATTACCGT TGAAGGCGCA
AACATTCTGA CTCGCTCGAT GATTATCTAT GGTCAAGGCG CTATCCGTTG TCATCCTTAT
GTGTTGCCCG AAATGGAGTC AGCATTTGAT ACGCAGTCTG GCCAAGGCTT AGCAAACTTC
GATGCGGCCA TCTTCGGCCA CATTGGTTTT GCGACCAGTA ACTTTGTGCG TAGCTTCTGG
TTAGGTCTGA CATCAAGCCG TTTCTCTAAC GCGCCTTACT CAGATAAAAC CAAGCGTTAT
TATCAACATA TGAACCGTTT CAGTGCTAAC CTTGCCTTGC TGTCAGACTT AGCGATGGCA
ACTTTAGGCG GTAACTTAAA ACGTAAAGAG CGTATTTCAG CCCGTTTAGG CGATCTATTA
AGCCAGTTAT ACCTCGCCTC TGCGACCTTA AAACGCTATC AAGATGAAGG CCGTCAAACC
GACGATCTAC CACTGGTACA ATGGGCTGTT GAAGATGCTC TGTATAAGTT ACAAGCTTCG
TTAGACGATT TACTGGATAA CTTCCCAATG GGTCTGGGCG GCGTATTACG CACCATCATG
TTCCCTTTCG GCCGTCCACT AAAACGTCCA AGCGATGTGT TAGATCACAA AGTCGCCAAG
ATTATGCAAA CGCCCTGTGA AAGTCGTGAT CGTTTAGGTA AAGGTCAGTT CTGGACTAAC
TCTGAGCACA ATGCTGTGGG TATCCAAGAG CAAACGCTGA AGGATATTCT GGCCGCCGAA
CCTTTATTCG ACAAGGTCTG TAAGGCTAGT GGCAAACGTT TACCTTTCAT GTGGTTAGAT
AAAGTCGCTG CTGAAGGTAA AGCCTTAGGC GTATTGAGCG ACAGCGAAGT ACAACTGTTG
GAAAGAGCCG AAATCGGCCG CATGAAGTCT ATCAATGTGG ACGACTTCGA CCCTGCAGAA
CTGCGCCCTG AAGTCGTTTC TACCACTTCA CAGGAACGCG CCGCTTAA
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| Protein sequence | MTTLLWLIAM ILVLGALAYL RVSLLTATIA PAVVMTAGWT LDVVGPISWI IFLVIALPLN
ISAFRQNVIS RPLMKVYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGNPNW KKLHNYPVAR
LSADEQAFLD GPVEEVCRMV NQHQVSHQLA DLPAEVWQYL KDHGFFAMII KKKYGGLEYS
AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTP EQQNYYLPRL AKGLEVPCFA
LTSPEAGSDA GSIPDFGIVC KGQWEGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLRDPD
HLLGDKEELG ITCALIPTDV EGVETGRRHF PLNCMFQNGP TRGKDVFVPL SFIIGGPKMA
GQGWRMLVEC LSVGRGITLP SNSAGGVKTA ALATGAYARI RRQFKLPIGK LEGIEEPMAR
IGGNAYLMDA VTSLTTTGID LGEKPSVISA IVKYHLTDRM QKCVIDAMDI HGGKGVCLGP
NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLPEMESAFD TQSGQGLANF
DAAIFGHIGF ATSNFVRSFW LGLTSSRFSN APYSDKTKRY YQHMNRFSAN LALLSDLAMA
TLGGNLKRKE RISARLGDLL SQLYLASATL KRYQDEGRQT DDLPLVQWAV EDALYKLQAS
LDDLLDNFPM GLGGVLRTIM FPFGRPLKRP SDVLDHKVAK IMQTPCESRD RLGKGQFWTN
SEHNAVGIQE QTLKDILAAE PLFDKVCKAS GKRLPFMWLD KVAAEGKALG VLSDSEVQLL
ERAEIGRMKS INVDDFDPAE LRPEVVSTTS QERAA
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