Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2528 |
Symbol | |
ID | 1170237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2657435 |
End bp | 2658298 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344361 |
Product | phage integrase family site specific recombinase |
Protein accession | NP_718114 |
Protein GI | 24374071 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAC TTCTGCAACA ATTCCATGAT GAGATTAGTT TACGTGGTTA CTCGGCCCGA ACGCGTAACG CTTATTTGTA TGCCATCACC CAACTTCAGC ACTATGCAAA CCAACCGCTC GATAACATTA CGGATGAGCA GCTTACGGCT TATTTCCGTT ACTTAAATCT TGAGCGGCAT CATTCCAGAG CTACTTTAAA GTTACAGCTT AATGGCATTC ATTTTTTCTA TGAACATGTC CTAAAACGTG ACTTTACGAT TCAGCTAAGT TTACCGAAAC GTCCGCACAA ACTGCCGCAA TTGCTTAGTT GCCAAGATAT CGCGGCACTG CTGTACCACT GTCAAAACCT GAAACAACGC GCTATGTTGG CGCTGTGTTA TGGTTGTGGT TTGCGTGTCA GTGAGTTAAC CCATATTAAG GTTGCTGATA TCGATGGGCA GCGGCAGTTA CTCAAAGTGT GTCAAGGCAA GGGTGCCTGC GACCGCTGGG TGATACTCTC ACCGACTTTA CTCATCCTGT TGCGTCAGTA TTGGCAAGCG TATCATCCCG TCGAATGGTT GTTTGCCTCG ACCTATCATG ATGTGGTTTA TCCGCTGCAT GAGTCGACCT TTCGTAAAGC GTTAGCGAAG GCGGCCCGCT TAGCGAGTAT CACTAAGCCA TGCAGTCCAC ACAGCCTAAG GCATGCTTAT GCAACCCATC AATTACAAGC GGGTATGCCA CTTCATCAAT TACAGGCTCA GCTTGGGCAT CACAGTATCA AGTCTACTGA ACGCTACTTG CATTGGTCGC CGGAATTAGG TCATCAAGGC TGTGACTTGC TAGCAAGTCT TGGGGGAAAT GCATGGCAAC CTCCTACCAT TTAA
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Protein sequence | MSSLLQQFHD EISLRGYSAR TRNAYLYAIT QLQHYANQPL DNITDEQLTA YFRYLNLERH HSRATLKLQL NGIHFFYEHV LKRDFTIQLS LPKRPHKLPQ LLSCQDIAAL LYHCQNLKQR AMLALCYGCG LRVSELTHIK VADIDGQRQL LKVCQGKGAC DRWVILSPTL LILLRQYWQA YHPVEWLFAS TYHDVVYPLH ESTFRKALAK AARLASITKP CSPHSLRHAY ATHQLQAGMP LHQLQAQLGH HSIKSTERYL HWSPELGHQG CDLLASLGGN AWQPPTI
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