Gene SO_2514 details

Gene Information

• Locus tag: SO_2514
• Symbol: nth
• ID: 1170225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2641732
• End bp: 2642427
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637344349
• Product: endonuclease III
• Protein accession: NP_718101
• Protein GI: 24374058
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0177] Predicted EndoIII-related endonuclease
• TIGRFAM ID: [TIGR01083] endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAAC AAAAACGCAT CCAAATCCTC ACCCGCCTAC GTGAAAACAA TCCTAAACCA 
CAGACCGAGC TGAATTTCTC CAGCCCTTTT GAATTACTGG TGGCGGTAAC GTTATCGGCG 
CAGGCAACCG ATGTGAGTGT GAATAAGGCG ACCGATAAAT TGTTTCCGGT GGCCAATACT 
GCCCACAGTA TTTATGCCTT AGGTGTCGAA GGATTAAAGG AATATATCAA GACGATTGGC 
CTGTATAACA ACAAGGCCGT CAATGTGATT AAGGCCTGCG AGATCTTGAT TGAAAAATAC 
AATGGTGAAG TGCCAGAAGA CAGAGAAGCC CTCGAGTCCC TTCCTGGTGT TGGCCGTAAA 
ACTGCCAATG TGGTGCTCAA TACCGCCTTT GGTTGGCCAA CTATCGCTGT CGATACCCAT 
ATCTTTCGCC TCGCTAATCG CACTAAATTT GCCCCAGGTA AAAATGTGGT CGAAGTCGAG 
GAGCGTATGT TAAAGGTCGT TCCCGCCGAA TTTAAAGTGG ATGTACACCA CTGGTTTATT 
CTGCATGGCC GCTACACCTG CCTTGCACGC AAACCCCGCT GCGGCAGCTG TATTATTGAA 
GATTTGTGTG AATATAAAAG CACTTTAAAG AGAAGGTTTA CCCCGAAGAA TAAATTCACG 
GATAAGGTGT TAAAAGCTAA AGGGCTTACA GGCTAG 

 

Protein sequence

MNQQKRIQIL TRLRENNPKP QTELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT 
AHSIYALGVE GLKEYIKTIG LYNNKAVNVI KACEILIEKY NGEVPEDREA LESLPGVGRK 
TANVVLNTAF GWPTIAVDTH IFRLANRTKF APGKNVVEVE ERMLKVVPAE FKVDVHHWFI 
LHGRYTCLAR KPRCGSCIIE DLCEYKSTLK RRFTPKNKFT DKVLKAKGLT G