Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2510 |
Symbol | |
ID | 1170221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2636787 |
End bp | 2639159 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637344345 |
Product | electron transport complex protein RnfC |
Protein accession | NP_718097 |
Protein GI | 24374054 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTAACTT TATTAGATCA ATTAGATAAA GGAACCCTTT GGCGCTCACC CGGTGGCATA CATCCACCCG AAGTCAAATT CCTCTCCAAT ACTACGCCGA TTAGCCAACT GCCATTAGCA CGAGAATACC TCGTGCCTGT GCCACAGGTC GGTGAGAACT GCACCCTTGC AGTAAAAGTG GGCGACAAAG TATTAAAAGG TACGCCCTTA ACTCAAGGTA CATCCATTTG GCATTTACCC GTGCATGCGC CAACCTCCGG CGCTGTTGTC GCCATTGAGC TAAGAGCCAG TAACCACGCC TCGGCGCTAC CAGTGAATAC CTGTGTGATT GCCGCCGATG GTGAAGATCG TTGGTGTGAA CTCACATCAG GCTCACTCGA TAGTCTGAGT AATCAACAAA TAATTACCAA GATCCATGCG GCAGGTATTG CCGGCATGGG CGGCGCAGCC TTTCCAAGCC ATATCAAGCT TAATCCCGTT AGTGAAATCG AATTAGTGAT TATCAACGGC GTAGAATGCG AGCCTTATAT CAGTGCCGAC GATCGACTCA TGCGTGAATA CAGCCAAGAG ATATTGGCGG GCATTGGCAT TATCCATCGC CTCTTAGCCC CCAAGCGCAT TGTGATTGCT ATTGAAGACA ATAAGCCCGA AGCAATACAA GCCATGCAGA ACGCAGTGAG TCAATCAACG CTTCCTACGG GCAGTGTTCG AGTCACAGTG ATCCCAACCA AGTATCCTTC TGGCGGTGAA AAACAGCTTA TTCAGATCAT CACCGGTCGT GAAGTACCCT CTGGCGCCAT CCCCGCTAAG CTTGGGATTG TGGTGCATAA CGTCGGTACT GCTTTTGCGA TTCACCAAGC TGTCACCCAA GGTAAACCAC TGATTGAACG TGTAGTTACC GTTACTGGAC AAAATGTCGG TAAACCTGGC AACTATTGGT TACCCATAGG CACGCCCGTT GAGCACGTGC TCGCCCATAC CGAATTTAAC GCCGCAGCCG ATCAAAAGGT GATTATTGGC GGCCCGATGA TGGGCCATGC GCTGCCAACG ATCCAAGTGC CCATTTTAAA AGGCACTAAC TGTATTTTGG TCCCGAGCAG TCAAGAGATT GGAACCACGC CAGAGGAAAA AGCCTGTATC CGCTGCGGCG AATGCGCCAA TGCCTGCCCT GCACTCTTGC TACCACAGCA ACTGTTTTGG CATGCCAAGG CTGAAGAATA CGACAAAGCA GCCAGCTATA ACCTCAAAGA CTGTATCGAA TGTGGCTGTT GTAGCTATGT ATGTCCGAGT GATATACCCC TCGTGGAATA CTACCGCATC GCCAAGTCAG CACTAAAACA AACCGCAGAT GAAAAACAGC AAGCCGAGCG CGCAAAATTA CGCTTCGAGG CACGACTTCA ACGTCTTGAA GAAGAAAAAC TCGCCCGTGA AGCCAAGGCG AAAGAAGCCG CTGCGCGTCG CCAAACGACC ATGACCACAA CGGATAAGGA TGCCGTTGCA CAGGCCATGG CGCGTATTGC CGCGAAGAAA GCAGCACAAA CCACCGCCGA TGACGCAACG GCTACGATCG CAACTGCTGA AGTTGATGCA GTCAGCACAC AAGCACCTAA GGGTAAAGCG GCTGTAGCCG CTGCGATTGC CCGCGCAAAA GCTAAGAAAG CCGCTGCAAC CAACGTTTCT CAAGCAGAAG ATGATGCTGA ATCTTCTAAG CAAACAGCGC CTACTGAACA AGCCGAGTCT TTATCGCAAA AAGATAAAGT CGCAGCGGCG ATTGCGCGGG CCAAAGCCAA AAAAGCGGCG ATGAATGCAG ACTCAGATGC TAACGAGGGT ACAGATACTG CTGAGATAAA CTCAGATAAG CCTGTTATTC CATCCGCAGC TAACACTGAG ATGGATGACA AAAAAGCCAA AGTGGCCGCT GCGGTTGCAC GCGCTAAAGC TAAAAAGGCC GCTGCGCAAC AAACCGAATC GAATGACGCT GCTGAAGTTC AGTCAAGTGA TGTCGCAGAG TCAGCTCAGC CAAGCAATGC GACACTTAAG CCTGAACTTA ACTCAGAACC TAATTCAGCA CCTAATTCAA CACTTAGTCC TGAAGATGAG AAAAAAGCCA AAGTGGCTGC AGCCGTTGCC CGTGCGAAAG CCAAAAAAGC TGCCGCGCAA CAGGTCGAAT TGAATGAGGA TATCCCGGCT CAACCAATCG TTGGGGCCGA GCCAGTATCA GCTCAACCAA GTAATGCGCC ACTTAGCCCT GAACTAAGCG CGCAACTCAG TCCAGAAGAT GAGAAAAAGG CCAAAGTGGC CGCCGCTGTT GCCCGCGCGA AAGCAAAAAA AGCAGCAAGG GAAGCTGATG CGATCAGTGA CTCAAATGAA TAG
|
Protein sequence | MLTLLDQLDK GTLWRSPGGI HPPEVKFLSN TTPISQLPLA REYLVPVPQV GENCTLAVKV GDKVLKGTPL TQGTSIWHLP VHAPTSGAVV AIELRASNHA SALPVNTCVI AADGEDRWCE LTSGSLDSLS NQQIITKIHA AGIAGMGGAA FPSHIKLNPV SEIELVIING VECEPYISAD DRLMREYSQE ILAGIGIIHR LLAPKRIVIA IEDNKPEAIQ AMQNAVSQST LPTGSVRVTV IPTKYPSGGE KQLIQIITGR EVPSGAIPAK LGIVVHNVGT AFAIHQAVTQ GKPLIERVVT VTGQNVGKPG NYWLPIGTPV EHVLAHTEFN AAADQKVIIG GPMMGHALPT IQVPILKGTN CILVPSSQEI GTTPEEKACI RCGECANACP ALLLPQQLFW HAKAEEYDKA ASYNLKDCIE CGCCSYVCPS DIPLVEYYRI AKSALKQTAD EKQQAERAKL RFEARLQRLE EEKLAREAKA KEAAARRQTT MTTTDKDAVA QAMARIAAKK AAQTTADDAT ATIATAEVDA VSTQAPKGKA AVAAAIARAK AKKAAATNVS QAEDDAESSK QTAPTEQAES LSQKDKVAAA IARAKAKKAA MNADSDANEG TDTAEINSDK PVIPSAANTE MDDKKAKVAA AVARAKAKKA AAQQTESNDA AEVQSSDVAE SAQPSNATLK PELNSEPNSA PNSTLSPEDE KKAKVAAAVA RAKAKKAAAQ QVELNEDIPA QPIVGAEPVS AQPSNAPLSP ELSAQLSPED EKKAKVAAAV ARAKAKKAAR EADAISDSNE
|
| |