Gene SO_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2510 
Symbol 
ID1170221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2636787 
End bp2639159 
Gene Length2373 bp 
Protein Length790 aa 
Translation table11 
GC content51% 
IMG OID637344345 
Productelectron transport complex protein RnfC 
Protein accessionNP_718097 
Protein GI24374054 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID[TIGR01945] electron transport complex, RnfABCDGE type, C subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAACTT TATTAGATCA ATTAGATAAA GGAACCCTTT GGCGCTCACC CGGTGGCATA 
CATCCACCCG AAGTCAAATT CCTCTCCAAT ACTACGCCGA TTAGCCAACT GCCATTAGCA
CGAGAATACC TCGTGCCTGT GCCACAGGTC GGTGAGAACT GCACCCTTGC AGTAAAAGTG
GGCGACAAAG TATTAAAAGG TACGCCCTTA ACTCAAGGTA CATCCATTTG GCATTTACCC
GTGCATGCGC CAACCTCCGG CGCTGTTGTC GCCATTGAGC TAAGAGCCAG TAACCACGCC
TCGGCGCTAC CAGTGAATAC CTGTGTGATT GCCGCCGATG GTGAAGATCG TTGGTGTGAA
CTCACATCAG GCTCACTCGA TAGTCTGAGT AATCAACAAA TAATTACCAA GATCCATGCG
GCAGGTATTG CCGGCATGGG CGGCGCAGCC TTTCCAAGCC ATATCAAGCT TAATCCCGTT
AGTGAAATCG AATTAGTGAT TATCAACGGC GTAGAATGCG AGCCTTATAT CAGTGCCGAC
GATCGACTCA TGCGTGAATA CAGCCAAGAG ATATTGGCGG GCATTGGCAT TATCCATCGC
CTCTTAGCCC CCAAGCGCAT TGTGATTGCT ATTGAAGACA ATAAGCCCGA AGCAATACAA
GCCATGCAGA ACGCAGTGAG TCAATCAACG CTTCCTACGG GCAGTGTTCG AGTCACAGTG
ATCCCAACCA AGTATCCTTC TGGCGGTGAA AAACAGCTTA TTCAGATCAT CACCGGTCGT
GAAGTACCCT CTGGCGCCAT CCCCGCTAAG CTTGGGATTG TGGTGCATAA CGTCGGTACT
GCTTTTGCGA TTCACCAAGC TGTCACCCAA GGTAAACCAC TGATTGAACG TGTAGTTACC
GTTACTGGAC AAAATGTCGG TAAACCTGGC AACTATTGGT TACCCATAGG CACGCCCGTT
GAGCACGTGC TCGCCCATAC CGAATTTAAC GCCGCAGCCG ATCAAAAGGT GATTATTGGC
GGCCCGATGA TGGGCCATGC GCTGCCAACG ATCCAAGTGC CCATTTTAAA AGGCACTAAC
TGTATTTTGG TCCCGAGCAG TCAAGAGATT GGAACCACGC CAGAGGAAAA AGCCTGTATC
CGCTGCGGCG AATGCGCCAA TGCCTGCCCT GCACTCTTGC TACCACAGCA ACTGTTTTGG
CATGCCAAGG CTGAAGAATA CGACAAAGCA GCCAGCTATA ACCTCAAAGA CTGTATCGAA
TGTGGCTGTT GTAGCTATGT ATGTCCGAGT GATATACCCC TCGTGGAATA CTACCGCATC
GCCAAGTCAG CACTAAAACA AACCGCAGAT GAAAAACAGC AAGCCGAGCG CGCAAAATTA
CGCTTCGAGG CACGACTTCA ACGTCTTGAA GAAGAAAAAC TCGCCCGTGA AGCCAAGGCG
AAAGAAGCCG CTGCGCGTCG CCAAACGACC ATGACCACAA CGGATAAGGA TGCCGTTGCA
CAGGCCATGG CGCGTATTGC CGCGAAGAAA GCAGCACAAA CCACCGCCGA TGACGCAACG
GCTACGATCG CAACTGCTGA AGTTGATGCA GTCAGCACAC AAGCACCTAA GGGTAAAGCG
GCTGTAGCCG CTGCGATTGC CCGCGCAAAA GCTAAGAAAG CCGCTGCAAC CAACGTTTCT
CAAGCAGAAG ATGATGCTGA ATCTTCTAAG CAAACAGCGC CTACTGAACA AGCCGAGTCT
TTATCGCAAA AAGATAAAGT CGCAGCGGCG ATTGCGCGGG CCAAAGCCAA AAAAGCGGCG
ATGAATGCAG ACTCAGATGC TAACGAGGGT ACAGATACTG CTGAGATAAA CTCAGATAAG
CCTGTTATTC CATCCGCAGC TAACACTGAG ATGGATGACA AAAAAGCCAA AGTGGCCGCT
GCGGTTGCAC GCGCTAAAGC TAAAAAGGCC GCTGCGCAAC AAACCGAATC GAATGACGCT
GCTGAAGTTC AGTCAAGTGA TGTCGCAGAG TCAGCTCAGC CAAGCAATGC GACACTTAAG
CCTGAACTTA ACTCAGAACC TAATTCAGCA CCTAATTCAA CACTTAGTCC TGAAGATGAG
AAAAAAGCCA AAGTGGCTGC AGCCGTTGCC CGTGCGAAAG CCAAAAAAGC TGCCGCGCAA
CAGGTCGAAT TGAATGAGGA TATCCCGGCT CAACCAATCG TTGGGGCCGA GCCAGTATCA
GCTCAACCAA GTAATGCGCC ACTTAGCCCT GAACTAAGCG CGCAACTCAG TCCAGAAGAT
GAGAAAAAGG CCAAAGTGGC CGCCGCTGTT GCCCGCGCGA AAGCAAAAAA AGCAGCAAGG
GAAGCTGATG CGATCAGTGA CTCAAATGAA TAG
 
Protein sequence
MLTLLDQLDK GTLWRSPGGI HPPEVKFLSN TTPISQLPLA REYLVPVPQV GENCTLAVKV 
GDKVLKGTPL TQGTSIWHLP VHAPTSGAVV AIELRASNHA SALPVNTCVI AADGEDRWCE
LTSGSLDSLS NQQIITKIHA AGIAGMGGAA FPSHIKLNPV SEIELVIING VECEPYISAD
DRLMREYSQE ILAGIGIIHR LLAPKRIVIA IEDNKPEAIQ AMQNAVSQST LPTGSVRVTV
IPTKYPSGGE KQLIQIITGR EVPSGAIPAK LGIVVHNVGT AFAIHQAVTQ GKPLIERVVT
VTGQNVGKPG NYWLPIGTPV EHVLAHTEFN AAADQKVIIG GPMMGHALPT IQVPILKGTN
CILVPSSQEI GTTPEEKACI RCGECANACP ALLLPQQLFW HAKAEEYDKA ASYNLKDCIE
CGCCSYVCPS DIPLVEYYRI AKSALKQTAD EKQQAERAKL RFEARLQRLE EEKLAREAKA
KEAAARRQTT MTTTDKDAVA QAMARIAAKK AAQTTADDAT ATIATAEVDA VSTQAPKGKA
AVAAAIARAK AKKAAATNVS QAEDDAESSK QTAPTEQAES LSQKDKVAAA IARAKAKKAA
MNADSDANEG TDTAEINSDK PVIPSAANTE MDDKKAKVAA AVARAKAKKA AAQQTESNDA
AEVQSSDVAE SAQPSNATLK PELNSEPNSA PNSTLSPEDE KKAKVAAAVA RAKAKKAAAQ
QVELNEDIPA QPIVGAEPVS AQPSNAPLSP ELSAQLSPED EKKAKVAAAV ARAKAKKAAR
EADAISDSNE