Gene SO_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2509 
Symbol 
ID1170220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2636202 
End bp2636783 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID637344344 
Productelectron transport complex protein RnfB 
Protein accessionNP_718096 
Protein GI24374053 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA TGTTAATTGC CGTTATCTTA TTAACCCTAT TGGCATTATT CTTTGGGGTA 
TTACTCGGAT TTGCCGCCTT AAAATTCAAG GTTGAAGGCA ACCCTATCGT TGATGAGCTT
GAAGCGATTT TGCCACAAAC TCAATGTGGT CAATGTGGTT ATCCCGGCTG TCGTCCCTAC
GCCGAAGCCA TTGCCAATGG CGACAAAGTC AATAAGTGCC CTCCCGGCGG CACTGCCACA
ATGGAAAAAC TCGCCAGTTT AATGGGCGTA GAACCAGAGC CTCTCAATGC TGAGGCGCAG
TCTCAGGTTA AAAAAGTCGC TTATATCCGT GAAGATGAGT GTATTGGCTG CACTAAATGT
ATTCAGGCCT GCCCAGTCGA TGCCATTATT GGCGCGGGTA AATTAATGCA TACCGTGCTC
ACTGCCGATT GCACAGGTTG CGATCTGTGT GTTGAGCCCT GCCCCGTCGA CTGTATCGAT
ATGGTGCCAG TGACCCAAAA TCTGAAAAAC TGGAATTGGC GTTTAAATGC GATTCCCGTG
ACTCTTATCC AAGAGACCCC GCACGAAGAG AAGAGAGGAT AA
 
Protein sequence
MSTMLIAVIL LTLLALFFGV LLGFAALKFK VEGNPIVDEL EAILPQTQCG QCGYPGCRPY 
AEAIANGDKV NKCPPGGTAT MEKLASLMGV EPEPLNAEAQ SQVKKVAYIR EDECIGCTKC
IQACPVDAII GAGKLMHTVL TADCTGCDLC VEPCPVDCID MVPVTQNLKN WNWRLNAIPV
TLIQETPHEE KRG