Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2493 |
Symbol | |
ID | 1170206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2618065 |
End bp | 2618784 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344322 |
Product | TetR family transcriptional regulator |
Protein accession | NP_718080 |
Protein GI | 24374037 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCATTT TTCGTTTGAC AACTCCCATA CCAATGTTTA ATTTAAACGA GTGTTTTAAA TTAATTCAAG GTCATGGAAT GGCAAGTCGA TCTGATACAA AAACGAGAAT ACTTGATGCT GCGGAGAAAC TCTTTGCCGA AAGAGGTTTT TCTGAGACGT CATTACGACT TATTACCAGC AAGGCAGAGG TCAATTTAGC GTCGGTAAAT TATCACTTTG GCTCTAAAAA AGAGTTGATC CGTGCAGTGT TAGCCCGCTA TTTAGATGTA TTTATGCCCG CTGCATCAAC GGCGATAAAG CGTCTGCATA CAGCGCCATC TCAGGCTTCG TTAGAGGAAA TTTTCTCAGC GTTAGTCGAT CCGTTATTGG ATTTAAATGA CTTGCGGACT GAAGGGACCA CGATTTTCCT GCAGCTACTT GGAAGAGGCT ACATTGAAAG CCAAGGACAT CTTCGCTGGT TTATCACCAC CCATTACGGA CAGCATTTAG ATACCTTCGT GAAGGCGGTG TCGGCAAGTG CTCCCCATAT ACCTCCTGCT GAAATGTTTT GGCGCTTACA CTTCACCCTC GGCACAATCG TTTTCACTAT GGCGTCCGCT GATGCGTTAA ACGATATTGC TGCGGCCGAA TTTGGTGAGC ACAACGATAT TGAAGCCGTG ATCCGCAAAG TGATCCCCTA CATGGCTGCG GGCGTATCTG TTCCCGTGGC TTCTAAATAA
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Protein sequence | MAIFRLTTPI PMFNLNECFK LIQGHGMASR SDTKTRILDA AEKLFAERGF SETSLRLITS KAEVNLASVN YHFGSKKELI RAVLARYLDV FMPAASTAIK RLHTAPSQAS LEEIFSALVD PLLDLNDLRT EGTTIFLQLL GRGYIESQGH LRWFITTHYG QHLDTFVKAV SASAPHIPPA EMFWRLHFTL GTIVFTMASA DALNDIAAAE FGEHNDIEAV IRKVIPYMAA GVSVPVASK
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