Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2490 |
Symbol | |
ID | 1170203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2612896 |
End bp | 2613750 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344319 |
Product | DNA-binding transcriptional regulator HexR |
Protein accession | NP_718077 |
Protein GI | 24374034 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCC TAGAAAAGGT TCAAAAAAGC CTCACCCATT TTAGTAAGTC AGAACGCAAG GTTGCAGAGG TCATCTTAGC CTCTCCGCAA ACGGCTATTC ACTCCAGCAT CGCCACTTTA GCTAAGATGG CAGATGTGAG TGAACCTACT GTAAACCGTT TCTGTCGCCG CTTAGATACT AAAGGCTTTC CTGATTTTAA GTTACATCTG GCACAAAGTC TCGCAAACGG CACACCTTAT GTGAGCCGCC ATGTCGAAGA AGATGATTCA CCAGAGTCAT ATACAACAAA AATATTCGAA TCCTCAATGG CTTCCTTAGA TACCGCTCGT CAAAGTTTAG ATGTTGCCGC CATTAATAAA GCCGTTGATA TTCTGACTCA GGCCAAGACA ATTTCCTTCT TTGGCTTAGG GGCATCAGCC TCAGTTGCCC ATGACGCGCA AAATAAATTT TTCCGTTTTA ATGTGCCTGT CATCTGTTTT GACGATGTTC TGATGCAACG CATGAGCTGT ATCAACAGCA ATGAAGGCGA TGTAGTGGTA TTAATTTCCC ACACTGGCCG CACTAAGTCT TTGATTGAAA TAGCACGTTT AGCAAGAGAA AACGGCGCCG CCGTAATTGG TATCACGGCA CGCAACTCGC CGTTATCGAT GGAATGTACC CTGCCCGTCA CCATGGAAGT GCCTGAGGAT ACGGATATGT ATTTACCAAT GGCCTCGCGT TTAGCGCAAT TGGTGACTAT AGATGTATTG GCGACTGGTT TTACGCTACG CCGCGGCCCA CGTTTCCGTG ATAATTTAAA ACGTGTAAAA GAAGTGTTGA AAGAGTCTCG TATCAATAAA GATCCGATAC TGTAA
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Protein sequence | MNTLEKVQKS LTHFSKSERK VAEVILASPQ TAIHSSIATL AKMADVSEPT VNRFCRRLDT KGFPDFKLHL AQSLANGTPY VSRHVEEDDS PESYTTKIFE SSMASLDTAR QSLDVAAINK AVDILTQAKT ISFFGLGASA SVAHDAQNKF FRFNVPVICF DDVLMQRMSC INSNEGDVVV LISHTGRTKS LIEIARLARE NGAAVIGITA RNSPLSMECT LPVTMEVPED TDMYLPMASR LAQLVTIDVL ATGFTLRRGP RFRDNLKRVK EVLKESRINK DPIL
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