Gene SO_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2481 
Symbol 
ID1170194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2602328 
End bp2603710 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content47% 
IMG OID637344310 
Producthypothetical protein 
Protein accessionNP_718068 
Protein GI24374025 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC CGACAGCGTT AAGTCTTATT CCACCCGTGG TGGTATTGGT GTTGGCCATT 
TGGTTACGCC GCCCCATTTT ATCTTTGATT ATTGGTGCGG TAACTGGATT TCTGTTACTC
GATCCGACGC AAGTTTTAAA TAATTTCGCA AGAACCTCAT TAAAGGTCAT GACCGATGAA
ACCATCGGTT GGTTGATTTT AGTGTGTGGC TGTTTTGGTG CCTTGATCGC CCTGCTAGTG
CGTACCGGTG GTGCATTGGC CTTTGGTCGA AATGCATTGA AATTTGCCAA AGGGCCAAGA
TCCTCCCTGT TTATGACTTT TATTCTCGGG ATTGTGATTT TTATCGATGA CTATCTGAAT
GCGTTAACCG TGGGTGAAAC CATGAAGCGT GTTACGGATA AGTTTAAGGT CTCCCGCGAA
ATGCTGGCTT ATGTGGTGGA TTCAACGGCG GCGCCAGTGT GTGTGTTAGT GCCACTTTCC
ACGTGGGCGG TATTTTTTGG TGGCTTGCTG GTCGATAACG GTGTTGCTGC AGAAGGTCAG
GGGATCAGCG TTTATATGCA AGCTATTCCC TATATGCTTT ACGCTTGGTT AGCCGTCGCC
ATGGTATTAC TCGTTTCACT GGGGATTGTA CCTGCGATTG GTCCGATGAA AAAAGCACAA
CTGCGCGCTG CAAACGGTGA ACCCGCAGAG GCACAAGTTG ATTTAGACCA AGTGCAAACC
TCTGATGAAT ATGCAATCGC GGCGATTGAA GAAGAGTTTA AGCATGCTGA TAATCAAGGC
AAGCTGCATA ACTTTTTAGT GCCGATTCTG TTACTGGTTG GCTTCACCGT TTATTTTGAT
ATCGATGTCT GGAAAGGGTT ATTAGCGACG CTGGTTATCA CCCTACCTTA TTATGCGGTG
CAGCGTTTGA TGCCATTATC AGAGATGATG GATCAAATGA TTGATGGCTT TAAGAGCATG
CTGCCAGCCA TTGGTACTGT AATTGCGGCA TTTGTGTTTA AAGATGTGTG TGATGCGATG
TTGCTACCAC AGTATGTTAT TGAGTCCTTA AGCCCATTTA TGACGCCGCA GTTATTGCCT
GCGGTAGTGT TCCTATCGAT GGCCATTCTG GCCTTTGCAA CGGGTTCTAG CTGGGGGATT
TTTGCGGTAA CGATTCCCAT CGTGATGCCA CTGGCGCAAT CGGTTGGCGC GGATATTCCA
TTAGTGATTG GTGCACTGTT ATCAGCGTCA TCATTTGGTA GCCAAGCCTG CTTCTACTCA
GATTCAACCG TGTTAGCCGC CCAAGGCTCG GGTTGTAATT TAGTCAGTCA TGCGGTGACT
CAGTTGCCCT ATGCCTTAAT TGCGGCTGTT ATTGCATTCT TTGGTTTTAT CCTGATAGCT
TAA
 
Protein sequence
MSEPTALSLI PPVVVLVLAI WLRRPILSLI IGAVTGFLLL DPTQVLNNFA RTSLKVMTDE 
TIGWLILVCG CFGALIALLV RTGGALAFGR NALKFAKGPR SSLFMTFILG IVIFIDDYLN
ALTVGETMKR VTDKFKVSRE MLAYVVDSTA APVCVLVPLS TWAVFFGGLL VDNGVAAEGQ
GISVYMQAIP YMLYAWLAVA MVLLVSLGIV PAIGPMKKAQ LRAANGEPAE AQVDLDQVQT
SDEYAIAAIE EEFKHADNQG KLHNFLVPIL LLVGFTVYFD IDVWKGLLAT LVITLPYYAV
QRLMPLSEMM DQMIDGFKSM LPAIGTVIAA FVFKDVCDAM LLPQYVIESL SPFMTPQLLP
AVVFLSMAIL AFATGSSWGI FAVTIPIVMP LAQSVGADIP LVIGALLSAS SFGSQACFYS
DSTVLAAQGS GCNLVSHAVT QLPYALIAAV IAFFGFILIA