| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2469 |
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| Symbol | |
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| ID | 1170183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2589746 |
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| End bp | 2592421 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637344299 |
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| Product | TonB-dependent receptor |
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| Protein accession | NP_718056 |
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| Protein GI | 24374013 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACGC AAACAACCGT AGCTCGTGCG GTTCGTTTTA GTTTATTAGC CTTAGTATCC
ACCTCGATTG CACCGATTGC GATGGCTGCA GAACAAGGTG CTGTAGATGC TAATAAAGTT
GAACGTATCG CTGTAACCGG ATCAAGAATC CAACGTACCG ATATGGAAAC ATCTTCTCCA
GTGACAGTTA TCAGCCGCGC AGAAATTGAT GCTTCTGGTA CTGCTACTGT GTCTGATTTT
GTGCGTAACC TATCGCAAAA CAGCTTTGGC TCTTTCCGCG AAGCATCAGG CTTTGGTTCT
GGACAATCTT CACAATCCAC AGTAAGCATG CGTGGTTTAG GTTCGCAACG TACTTTAGTG
CTAATCGATG GTCGTCGTAT GGGCTCGTCA GTTGCCTTTG GTGGCGGTAC ACAAAACCTC
AACGTTGTCC CCATGGCAGC GATTGAACGT ATTGAAGTTC TGCGTGACGG CGCATCAGCG
GTTTATGGTT CTGATGCGGT TGCTGGTGTA ATTAACATTA TCACCAAAAA AGAATTTGAA
GGTGTTGAAT TTGATGCAGA TTTAGGTGCG ACTCAACATG GTGGAGCAGA AAAATCAAAT
GCTCGTTTCA CTTTTGGTGT CAATAGCGAA AAAACCAATA TGGTTGCCTC GGTTGAATAC
TATAATCGCG CAGCACTTTA CGATGCGGAT CGCGATTACA GCGATACCCT TTATAGCGCT
CATGGATGGC CTGGTACTGG TTCTTATGTT GATAAAACAA AACCAATTTT AGATGCGGAC
GGAAAACCAA CCGGAAAATA TCAAACAGTA TCATTTGCAG ATAAACGTTG CGGTGAGGGA
AACTCTTTAG TCACAGGACC TGATGGAAAT CAAACTTGTT CATATAATGC TGCAGCAGAA
TCGGCAACGA TGGCGGCACA AGAACGATTC TCAACCTTCG TCAAAGTAGA TCACGAGTTA
ACTGAAGATA TTAACTGGAC TAACCGCTTA ATGATGAGCC GCGTTTGGAC CGAGGGGCAA
TATGCCGCCG CACCAAACAG TTATAGCCCT AAATTACGTT GGACAAAAGA AAACAGTGAT
ATTTATCTAG CAACGGTTAA TAAATATGGC AACGATTATT TAAAAAACCA ACTGAAGTAT
GATGCTAAAG GTAACTTAAT TGGTGGTGAC ACCATCAATT TAAAAATGCG TACGACGCCA
CTTGGGCCAC GTGTTACTAA TGTTGAAGAT ACCGATATCA ACTTCTTAAC TGCGCTTGAA
GGTCATAGTG ATATTTTAGG CGGCACCGCT TGGAACTTAG GTGCTCAGTG GATTCGCTCA
GATGTCACCA CCATTCAAAC TGGCTTAGCT AATGCCAATA TGATCCAAGA GTTTTTGGAT
AATGGTAAAT TAGATTACTT TGCCGCGGGT ACAGGTTATG TTGAAGGCTC AAACGAGCTG
CAACTGCAAG AAGCCGCCCA TACAGGAATT TTCACTGGTC GCGTCCAAAC CTACGGAATC
GATGGTGGTG CCAGCTTTGA TTTATTTGAA TTACCAGCAG GCACAGTCCC CTTAGCCATC
GGTTTTGAAT TTATGCGTAC CGAGTACGAC AAGACTAATG ATGCGGGTTC AAACCTAGGT
AATATTATCG GTACTTCAGG TGGCGACAAT ATCCAAGGTA AATCACGAGA AGTGTTATCT
TTCTCTGCTG AGACTATGTT CCCGATTATC GATGGACTTG ATTTAGAATT ATCTGCACGT
TTTGATGACT ACAGTGATTT TGGCAGTACC TTTAATCCTA AAGTGGGTTT AAGTTACCGT
CCCGTTGATT CGCTGTTAGT TCGTGCGTCT TATGGCACAG GTTTTAGAGC TCCGACCTTT
GATGACTTAT ACGCTACAGC TTCAGAAACC TATCTTTGGG CTAGAGACTG GACGCAATGT
CCGGGTAATC CTAATGGTTG CGTGCAAGAA CAATTCAAAG CTCAATATCA AGGGAATGAT
GACTTAGAAC CCGAAGAGTC GACTTCACTC TCTTTAGGCT TGGTATGGAA CGTCACCGAC
GCATTAGATT TTGAACTCTC ATACTATGAC ATTCAAATCG ACAATGTGAT CAGCACCATG
TCAACCCAAG ACGTCCTTAA CCAAGAGCGT GATGGCTTTG ATATGTCAAA TGTTCTGTTT
AGAGACCCTG TAACAGGTAA AATTGATTAT GTTGTTCTAC AGAAGATGAA CCTCGGTGAA
TTAAAAACTT CTGGTATTGA CTTCAATATT CGTTACCTGC TTGAAACCAG TGTGGGTGAG
TTCCGCTTCG GTGCAGAAAC TAACTACGTA TTAAGCTGGG AGTCGAAGGA TGGTCCTTAT
TCCGAGCTTG AAGATATTAT CGGTGATGTT GGTCAACCAC AATTCCGTGC CAACCTCAGC
ACAACTTGGA CTCAAGGTGA ATGGGAAGCA TCATTGTTTG CCCGTTATAC TGATAGCCAA
GAAGATGAGG ACTATGGCAA AACACCAAGC CAGTGGTTGT TAGATGCGCA AGCAGGTTAC
AACTTACCGT GGAATGCTAA GGTGAATGTA GGTATTCGTA ATCTGCTCGA CGAAGAACCA
GCAATGAATG AGAACTTGGG CTTCCCAGGA TATGACACCT ACTTGTACGA TCCTATTGGC
CGTGAATACT ATGTTCGCTA CAACCAAAAA TTCTAA
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| Protein sequence | MTTQTTVARA VRFSLLALVS TSIAPIAMAA EQGAVDANKV ERIAVTGSRI QRTDMETSSP
VTVISRAEID ASGTATVSDF VRNLSQNSFG SFREASGFGS GQSSQSTVSM RGLGSQRTLV
LIDGRRMGSS VAFGGGTQNL NVVPMAAIER IEVLRDGASA VYGSDAVAGV INIITKKEFE
GVEFDADLGA TQHGGAEKSN ARFTFGVNSE KTNMVASVEY YNRAALYDAD RDYSDTLYSA
HGWPGTGSYV DKTKPILDAD GKPTGKYQTV SFADKRCGEG NSLVTGPDGN QTCSYNAAAE
SATMAAQERF STFVKVDHEL TEDINWTNRL MMSRVWTEGQ YAAAPNSYSP KLRWTKENSD
IYLATVNKYG NDYLKNQLKY DAKGNLIGGD TINLKMRTTP LGPRVTNVED TDINFLTALE
GHSDILGGTA WNLGAQWIRS DVTTIQTGLA NANMIQEFLD NGKLDYFAAG TGYVEGSNEL
QLQEAAHTGI FTGRVQTYGI DGGASFDLFE LPAGTVPLAI GFEFMRTEYD KTNDAGSNLG
NIIGTSGGDN IQGKSREVLS FSAETMFPII DGLDLELSAR FDDYSDFGST FNPKVGLSYR
PVDSLLVRAS YGTGFRAPTF DDLYATASET YLWARDWTQC PGNPNGCVQE QFKAQYQGND
DLEPEESTSL SLGLVWNVTD ALDFELSYYD IQIDNVISTM STQDVLNQER DGFDMSNVLF
RDPVTGKIDY VVLQKMNLGE LKTSGIDFNI RYLLETSVGE FRFGAETNYV LSWESKDGPY
SELEDIIGDV GQPQFRANLS TTWTQGEWEA SLFARYTDSQ EDEDYGKTPS QWLLDAQAGY
NLPWNAKVNV GIRNLLDEEP AMNENLGFPG YDTYLYDPIG REYYVRYNQK F
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