| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2459 |
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| Symbol | cga |
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| ID | 1170173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2575975 |
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| End bp | 2578518 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344291 |
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| Product | glucoamylase |
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| Protein accession | NP_718049 |
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| Protein GI | 24374006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC CATTTACCGA GCAGCCTAAA CAAGACTGTG GCCAACTCAA GCAACACAGT
AGCAGTTTAA CCTTAAAGCC CATTGCCTTA GCGATCACAG CCAGCCTTAT CGGATTGGCC
AGTTTGAGCG CCTGTTCACC GATAGCGGAT AAATCGGCTT CATCAACCAC CTCCAATGCC
GTATCAAATA ACGAGATAAA CACGGCAAGC TATAACATTG CCCCCGGTGC TCCCGGCAAA
GCGCCAACTT GGGCATTCTC CGGCAAAACC GGTATTGGCA CATCCTATGA GCCTTATACC
CAAGGGCAAT ATCAAGATAG CCAGCAAAAC CCCATTAGCC GGGTGTGGTT CTCGATTGCG
CAGGGGATTT TAACCGAGAC CATGTTCGGC CTTATCCACA ATGCTCAGCT CAAAGAATTG
CAATTTGTGA TCACCGGCAA TGGCTTTGTC GATACCGAAA AAGACAATAC CATCAGCAGT
ATTGAATATT TAGATACCGA TGCCAATGGC CGACCGCAAT CCTTGGCCTA TAAGATAATC
AATCGTGATG TTGAAGGTAA GTATCAGATA GAAAAACATA TTTTCACCGA TCCAGGCCGC
GATACGTTGG TGATGCGCGT CACTTTTACC GCCTTTGAAG CAGGTATCAC GCCGCATTTA
TACGTTAATC CTCATATTGA TAATGCGGGA GCCAATGATA TAGGCCGAAT CGATCATCAA
GCGCTTATCG CCTACACCGC CGCCCCGCAC AGCAGCGTGA TGACGGTCAA ATCCGATATC
AACTTTGTGC GCGCAACTAC AGGCTTTGAG GGTATCTCAG ATGGGCTTGC CGATTTAGCC
GACAACGGCA CACTGGATAC CCTGTATAGC GCCACAAGTG CGCCCGATAA TCGTACTCAA
GGCAATATCG CCTTTACCGC GAGTTATCCA GAAGTAACAC CAAATCAACC GCTTAACATC
AATTTAGCGA TTGGATTTGG CCACGATGAG TTAAGCAGCT TAACCAATGC CAAGGCTACG
TTAAATGCAG GTTACGATGC TGTGTTAGGT CAATACAACG CTGGATGGCG CAGTTATTTA
CAGTCACTGC CCGCAATCGC AGGGATGGCA AAAAGCACCA CAGATAATGG CAAACTGCTC
TACACCAGCG CCATGGTACT CAAAGCGCAG GAAGATAAAA CCTATGCAGG CGCACTTATC
GCATCACTAT CCAACCCTTG GGGTGATACC GTCTCGGCCA TCACCCCCAG TACAGGTTAC
AAGGCCGTTT GGCCGCGCGA CTTTTATCAA TGCGCGATGG CATTTTTGGC CATGGGTGAT
ACCCAAACCC CCAAAGTCGC CTTCGAATAC CTTAAAAAAG TGCAAGTGAG TGATAAAACC
TCAGGCTTTA GCGGCACGCC CGGCTGGTTT TTACAAAAGA CCCATGTGGA TGGCCAAATT
GAATGGGTGG GCGTACAGCT TGACCAAACG GCCATGCCCA TTATGCTCGG CTGGAAACTC
TGGCAAGCGG GTGGGCTAAG TCAAACTGAA CTGAGCTATT GGTATCAAGA GATGTTAAAA
GGCGCGGCGG ACTTTTTAGT CAGCGGCGGC GAGGTTAATC TTGACTGGAA CCACACGCCA
GTCACACCGC CAAAAACCCA GCAAGAACGC TGGGAAGAAC AAGCGGGCTT CTCACCCTCC
ACCACGGCCG CGGTGATCGC AGGTTTAGTG ACAGCAAGTG ATATTGCCAA AGCGGTGAAT
GATCTCAATG CCAGCCAGCG CTATTTAGAT TCTGCCAAAA CGCTTAATCA ACAGCTTGAA
AAACACTTAG TGACGACCCA AGGGTTGCTC ACGGATAGCC AAGGCGTGAG TACTCCTTAT
TATCTGCGAT TAAGCCCCCA TGGTGAGCCA AACACTGCGA CTAAACTGGC TGCAAATAAC
GGTAAAGCGG GATTAGATCA ACGCCAGATC CTCGATGCAG GCTTTTTAGA ACTGGTGCGC
TATGGCGTGC GTGGCGCAAC CGACAAGCTC ATCAATCAAA GTCTGGCACT TGTAGATAAC
ACTAAGCTAG AAGACAATCT ACGCCTCAAA TATAGCTTTA CCGCAAAAGA CGGCAGCAGT
GTTCCGGGCT TTAGGCGTTA TGGTAACGAT GGCTATGGCG AAGACACTGT CACTGGCGCG
AACTACGCTG AATCGGGTGG TAATAGCGAC AATCAACGCG GCCGAGTATG GCCCTTCTTC
ACCGGCGAGC GGGGACATTT TGAACTGGCT TTAGCAAGTG CAAAGGGGGA ATTGACTGGC
ACGAAAGGAC AGCAAACCAA GCAACAACTT ATCAATACCT ATGTACAAGG TATGGAAACC
TTTGCTAATG CCGGCATGAT GCTCCCCGAG CAGGCATGGG ATGGTGTTGG TAACGCCACA
CGTTATCAAT ATCGACTCGG TCAAGGCACT AACTCTGCCA CTCCGCTTGC TTGGACTCAC
GCTGAATATA TCAAGTTAGT GCGCTCAATG AATGATGGCC AACTGTGGGA TCATTACCCT
ATTGTCCCGG AGACGTTGAA ATAA
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| Protein sequence | MNMPFTEQPK QDCGQLKQHS SSLTLKPIAL AITASLIGLA SLSACSPIAD KSASSTTSNA
VSNNEINTAS YNIAPGAPGK APTWAFSGKT GIGTSYEPYT QGQYQDSQQN PISRVWFSIA
QGILTETMFG LIHNAQLKEL QFVITGNGFV DTEKDNTISS IEYLDTDANG RPQSLAYKII
NRDVEGKYQI EKHIFTDPGR DTLVMRVTFT AFEAGITPHL YVNPHIDNAG ANDIGRIDHQ
ALIAYTAAPH SSVMTVKSDI NFVRATTGFE GISDGLADLA DNGTLDTLYS ATSAPDNRTQ
GNIAFTASYP EVTPNQPLNI NLAIGFGHDE LSSLTNAKAT LNAGYDAVLG QYNAGWRSYL
QSLPAIAGMA KSTTDNGKLL YTSAMVLKAQ EDKTYAGALI ASLSNPWGDT VSAITPSTGY
KAVWPRDFYQ CAMAFLAMGD TQTPKVAFEY LKKVQVSDKT SGFSGTPGWF LQKTHVDGQI
EWVGVQLDQT AMPIMLGWKL WQAGGLSQTE LSYWYQEMLK GAADFLVSGG EVNLDWNHTP
VTPPKTQQER WEEQAGFSPS TTAAVIAGLV TASDIAKAVN DLNASQRYLD SAKTLNQQLE
KHLVTTQGLL TDSQGVSTPY YLRLSPHGEP NTATKLAANN GKAGLDQRQI LDAGFLELVR
YGVRGATDKL INQSLALVDN TKLEDNLRLK YSFTAKDGSS VPGFRRYGND GYGEDTVTGA
NYAESGGNSD NQRGRVWPFF TGERGHFELA LASAKGELTG TKGQQTKQQL INTYVQGMET
FANAGMMLPE QAWDGVGNAT RYQYRLGQGT NSATPLAWTH AEYIKLVRSM NDGQLWDHYP
IVPETLK
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