Gene SO_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2448 
Symbol 
ID1170163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2563324 
End bp2563854 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID637344281 
ProductMutT/nudix family protein 
Protein accessionNP_718038 
Protein GI24373995 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAT TGAAGTCTAC CCAAGCTGCC AATATCGATC TTAAACAGGC ACGGATCTTT 
TATCGCCAAG CGGCCCGTGC CATTGTGCTG TCGGGTGAAG ATATTTTGCT GCTCTATACC 
CAAAAATATC GTGATTACGG CTTACCCGGT GGTGGTGTCG ATAAAGGCGA GAGCATCGAG 
GTTGGCCTTA TTCGTGAGTT ACAGGAAGAA ACGGGCGCAA TTGCTGCCCA TGTGCTCGCG 
CCCTTTGGCC GTTATGAGGA ATATCGACCT TGGTTTCGTG AAGGCGCCAA CGTAGTGCAC 
ATGGATTCCT ATTGCTACCT GTGTGAAATC GATATGAGTT TAGGTTACCG TGGCTTAGGT 
GAGCCAAGGC TTGAAGCTCA TGAGGTGAAA AATGGCATGC GCCCTGAGTG GATCAATATC 
CATCAAGCCA TTGCCCATAA TGAAGAAATT CAGCACACCT TTCCCAATAA AGGCCAATCT 
ATCGACAGAG AAACCTTTTT GCTCAAACAG ATAGTTGCAG AATTATTGTA G
 
Protein sequence
MRLLKSTQAA NIDLKQARIF YRQAARAIVL SGEDILLLYT QKYRDYGLPG GGVDKGESIE 
VGLIRELQEE TGAIAAHVLA PFGRYEEYRP WFREGANVVH MDSYCYLCEI DMSLGYRGLG 
EPRLEAHEVK NGMRPEWINI HQAIAHNEEI QHTFPNKGQS IDRETFLLKQ IVAELL