Gene SO_2440 details

Gene Information

• Locus tag: SO_2440
• Symbol: thiH
• ID: 1170155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2553968
• End bp: 2555095
• Gene Length: 1128 bp
• Protein Length: 375 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637344273
• Product: thiamine biosynthesis protein ThiH
• Protein accession: NP_718030
• Protein GI: 24373987
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTG TCGACCATTT TGCCCGCATC GAACGGGATA AGTTATTGCT GGCGTTGTAT 
TCATGCACTG CTGCTGATGT TGAACGTGCC CTAGTTCAAC CAGAAGGCAA CTTACAGAGT 
CTGCTCGCTT TGCTGTCTCC TGCAGCAGAG CCCTATATCG AAGAGATGGC GCAGCGCTCG 
GCGGCGCTCA CTCGGCAACG CTTTGGGGCC AATATCGGAC TGTACTTACC ACTGTACTTG 
TCCAATCTTT GCGCTAACGA ATGCGATTAC TGTGGCTTTA GCATGAGTAA TAAACTGAAG 
CGTAAAGTAC TGAATGAACA GGAACTCGCC GCCGAAATAG CGATTATTAA ATCCCGCGGC 
TTTGATTCTA TCTTGCTGGT GTCGGGTGAG CATGAAACTA AGGTCGGGAT GGATTACTTT 
CAGCGGGTTT TACCGTTGGT AAAACAGCAG TTTAGTTATT TAGCCATGGA GGTGCAGCCG 
CTTGAGGAAA GCCATTATCG TAAGCTCGTC GAGCAGGGAC TCGATGCGGT GATGGTGTAT 
CAAGAAACCT ATCAAGCCGA GACTTATGCT AAACATCACA CCCGAGGTAA AAAACAGGAC 
TTCGCCTATC GGCTTGCCAC GCCCGATCGC GTTGCCCGTG CGGGTGTCGA TAAGATAGGC 
CTAGGTGTGT TACTGGGCTT AGATGACTGG CGGTTAGACG CGTTGATGAT GGGCTATCAT 
CTTGATTATT TAGAGCGGCA CTATTGGCGC ACCCGTTTTA GCATTTCGTT ACCACGATTG 
CGACCTTGTA CAGGAGGCAT TGCACCAAAA GTACATTTAA CCGATCTGGG ACTCGTGCAA 
ATGATCTGCA CCTTTAGACT TTTTAATCAA CAACTTGATA TCAGTTTATC GACACGCGAG 
GCGCCATCAC TTCGGGATAA TTTACTGCCA CTTGGGATAA CGCAAATGAG TGCGGGTAGT 
TCAACCCAGC CTGGCGGTTA CCAAGTTCCC GACAGTCAGC TCGATCAGTT TGAGATCAGT 
GATGATCGAA CTGTTGAGCA GGTCATTACT CAAATGCGAC TTAAGGGTTT TAATCCAGTC 
TTTAAAGATT GGGAATCCGC TTGGATTGTA CCTAAAATGC GAGTTTAA 

 

Protein sequence

MSFVDHFARI ERDKLLLALY SCTAADVERA LVQPEGNLQS LLALLSPAAE PYIEEMAQRS 
AALTRQRFGA NIGLYLPLYL SNLCANECDY CGFSMSNKLK RKVLNEQELA AEIAIIKSRG 
FDSILLVSGE HETKVGMDYF QRVLPLVKQQ FSYLAMEVQP LEESHYRKLV EQGLDAVMVY 
QETYQAETYA KHHTRGKKQD FAYRLATPDR VARAGVDKIG LGVLLGLDDW RLDALMMGYH 
LDYLERHYWR TRFSISLPRL RPCTGGIAPK VHLTDLGLVQ MICTFRLFNQ QLDISLSTRE 
APSLRDNLLP LGITQMSAGS STQPGGYQVP DSQLDQFEIS DDRTVEQVIT QMRLKGFNPV 
FKDWESAWIV PKMRV