Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2419 |
Symbol | |
ID | 1170134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2526764 |
End bp | 2528782 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344252 |
Product | 2,4-dienoyl-CoA reductase, putative |
Protein accession | NP_718009 |
Protein GI | 24373966 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTC CCCATTTATT AGAACCCTTA GATCTGGGAT TTACCCAGCT CAAAAACCGA GTGTTGATGG GCTCCATGCA CACAGGTTTA GAAGAAGAAA AGGGCGGATT TGAGAAACTG GCAGCGTTTT ATAAAGAGCG CGCATTGGGC GGCGTGGGGT TAATTGTTAC TGGCGGGATA TCGCCAAATC TACGTGGCCG ATTAACACCC CATGCCTGTC AGCTCAGTTT CCCCTGGCAA GTTGGCAAAC ACCGTATTGT GACACAAGCG GTACATGAGG CTGGCGGTAA AATCTGTATG CAAATTCTGC ATGCGGGTCG CTATGGTTAT CATCCATTTT CACAGGCGCC GAGTAAGATT AAATCACCGA TTACGCCTTT TACGCCATCA GCAATGTCGA GCCGTCAAGT GCGTGGCACG ATTAAAGACT ATGCCAGTTC CGCCGCGTTA GCGAAAAGAG CAGGGTATGA CGGGGTTGAA GTCATGGGCT CAGAAGGTTA CTTAATCAAC CAATTTATCA GTTCGCGCAC CAATACCCGC ACCGATGAAT GGGGCGGCAG TTTTGAAAAA CGCGCACAAT TCCCAATTGA AATTGTGAAT GCCATCCGCG CTAAAGTAGG CAAAGATTTT ATCATTATCT TCCGCTTATC TATGCTCGAT TTGGTTGACA ATGGTTCAAC TTGGGATGAA GTGGTACAAC TGGCAAAGTG GCTTGAACAT GCCGGTGTAT CGATTATCAA CACCGGGATC GGCTGGCATG AAGCCCGTGT ACCCACTATT GCGACCAGTG TTCCGCGTGG CGCCTTTGCT TGGGTGACAC AAAAGCTTAA ACAGTCGGTT GCTGTGCCGT TAATCGCAAC AAACCGTATT AATACCCCTG AAATTGGCGA GCAAATCATT GCCTCTGGCC AAGCGGATAT GGTGTCAATG GCACGGCCAT TCCTTGCCGA TCCTGAGTTT GTGAATAAAG CTGCAGCCAA TACGCCTGAA CTTATCAATA CCTGTATTGG TTGCAATCAG GCCTGTTTAG ATCATACGTT TTCGCTTAAA CGAGCTACCT GTCTAGTCAA CCCTCGTGCC TGTTATGAGA CTGAAATTAA TTTTTTACCC ACCAGTAAAA AAAAGCGTAT TGCGGTGATG GGTGCAGGCC CCGCGGGGAT GGCATTTTCA GTTTATGCGG CGATGCGCGG TCATGAGGTT GTGCTTTTTG AAGCAAAATC CGAGGTAGGC GGTCAGTTTA ACTTGGCGCG TAAAATCCCT GGGAAAGAAG AGTTTAACGA GACTATTCGT TATTTCCTCA ATCAAATCAA ACTGCATAAA ATTGATCTGC GCTTAAATAC CCGCTTGGAT GCTAAGGTAC TGGAAACCGA AAAGTTTGAT GAAATCGTCA TTGCCTCGGG CGTGGTACCG CGTGAGTTAA GCTTGCCTGG ATTTGATAGC CCCAAAGTGG TGGATTATCA ACAGGTGCTG ACGGGCCAAG CGTTAGTTGG TGGCAAAGTG GCCCTGATTG GAGCTGGCGG TATTGGCTTT GATATGGCGC ATTACCTTTG TGAATCGGAG TCGAGCACCC TCAATCCTGA TAAATGGTTA AAACAGTGGG GTATCGATAA GCAATATCAG CATGCAGGTG GTTTAACGCA GCCTGAAGTT GAGAATACTG ACCACAGACA AGTCTATTTG CTGCAACGCA AAACCTCGAA AATGGGTCAA GGCTTAGGTA AAACCACCGG TTGGATCCAT CGCTTGGTGT TAAAGCAGCA TGATGTGAAG ATGAAAATGG GCGTTAGCTA TGAAAAGTTT GATGATGCTG GTCTACATAT ACGTGTTGGC GAACAAGTCG AAGTGTTGGC TGTGGATAAT GTGATTCTCT GCGCTGGACA AGAGTCTAAC CGTACTTTAG TGGATGAGAT GAAAGCCTCG GGTATTCCCG TGCATTTGAT TGGTGGTGTT GATGTCGCCG CAGAACTTGA TGCCAAACGG GCCATTCGTC AAGGTGCAGA ACTTGCCATG CGTCTTTAG
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Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYKERALG GVGLIVTGGI SPNLRGRLTP HACQLSFPWQ VGKHRIVTQA VHEAGGKICM QILHAGRYGY HPFSQAPSKI KSPITPFTPS AMSSRQVRGT IKDYASSAAL AKRAGYDGVE VMGSEGYLIN QFISSRTNTR TDEWGGSFEK RAQFPIEIVN AIRAKVGKDF IIIFRLSMLD LVDNGSTWDE VVQLAKWLEH AGVSIINTGI GWHEARVPTI ATSVPRGAFA WVTQKLKQSV AVPLIATNRI NTPEIGEQII ASGQADMVSM ARPFLADPEF VNKAAANTPE LINTCIGCNQ ACLDHTFSLK RATCLVNPRA CYETEINFLP TSKKKRIAVM GAGPAGMAFS VYAAMRGHEV VLFEAKSEVG GQFNLARKIP GKEEFNETIR YFLNQIKLHK IDLRLNTRLD AKVLETEKFD EIVIASGVVP RELSLPGFDS PKVVDYQQVL TGQALVGGKV ALIGAGGIGF DMAHYLCESE SSTLNPDKWL KQWGIDKQYQ HAGGLTQPEV ENTDHRQVYL LQRKTSKMGQ GLGKTTGWIH RLVLKQHDVK MKMGVSYEKF DDAGLHIRVG EQVEVLAVDN VILCAGQESN RTLVDEMKAS GIPVHLIGGV DVAAELDAKR AIRQGAELAM RL
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