Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2416 |
Symbol | nrdB |
ID | 1170131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2523226 |
End bp | 2524356 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344249 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | NP_718006 |
Protein GI | 24373963 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTACT CTACTTTTTG CCAAACACCC AACGATGCCA CCCGTGAACC TATGTTTTTC GGACAATCGG TAAACGTCGC ACGTTATGAC CAACAAAAAT ATGAAGTGTT TGAAAAACTA ATCGAAAAGC AGCTGTCTTT CTTCTGGCGC CCAGAGGAAG TCGATGTGAG CCGCGATAAA ATCGACTACA ACTCACTGCC AGATCATGAA AAGCATATTT TTATTTCTAA CCTGAAATAT CAAACGCTGC TCGATTCAAT TCAAGGCCGT TCGCCAAACG TGGCTTTTTT GCCACTGGTA TCACTACCTG AGTTAGAGAC TTGGATTGAA ACCTGGTCAT TCTCCGAGAC CATTCATTCG CGCTCATACA CTCACATTAT TCGTAATATC GTCAACGATC CTTCGGTGAT TTTTGACGAT ATCGTGGTGA ACCATGAGAT CCTGCGCCGT GCCACAGACA TTGCAGAGTT CTACGATCAC CTCATCAAAC TGACCCAGAT ATACCACCTA CTCGGTGAAG GCACCCATGT AATTGATGGT GAGCCAGTAG AGGTGAATAC CCGCACCTTG AAAAAAGCCC TATACCTTTG CATGATGTCA GTTAACGCGC TCGAAGCTAT TCGCTTCTAC GTGAGCTTTG CCTGCTCATT TGCCTTCGCT GAACGTAAGC TCATGGAAGG TAACGCGAAA ATTATTCGCC TTATTGCCCG TGATGAAGCG CTGCACTTAA ACAGCACCCA GCACATCTTA ACCATCATGC AGGGTGGCAA AGACGATCCT GAAATGGGCG AGATTGCAAT TGAATGCCAA CAGGAAGCCT ACAACCTGTT CCTTAAAGCC GCCGAGCAAG AAAAAGAATG GGCCAAATAC CTGTTCAAAG ACGGCTCTAT GATCGGTCTA AACGAGCAGA TCCTCTGCCA ATATGTTGAG TACATTACTA ACCAACGGAT GAAGTCAGTT AACCTGCCAC AGCCTTACGC CGAACAGACT AACCCATTAC CTTGGATGAA AAACTGGTTA GAGAGTGATG CGGTACAAGT GGCTCCCCAA GAAGTGGAAG TTTCATCCTA TCTGGTCGGC CAAATCGATG CGGCCGTCGA CAGTGATGAA TTCCTTGATT TCGATCTCTA G
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Protein sequence | MTYSTFCQTP NDATREPMFF GQSVNVARYD QQKYEVFEKL IEKQLSFFWR PEEVDVSRDK IDYNSLPDHE KHIFISNLKY QTLLDSIQGR SPNVAFLPLV SLPELETWIE TWSFSETIHS RSYTHIIRNI VNDPSVIFDD IVVNHEILRR ATDIAEFYDH LIKLTQIYHL LGEGTHVIDG EPVEVNTRTL KKALYLCMMS VNALEAIRFY VSFACSFAFA ERKLMEGNAK IIRLIARDEA LHLNSTQHIL TIMQGGKDDP EMGEIAIECQ QEAYNLFLKA AEQEKEWAKY LFKDGSMIGL NEQILCQYVE YITNQRMKSV NLPQPYAEQT NPLPWMKNWL ESDAVQVAPQ EVEVSSYLVG QIDAAVDSDE FLDFDL
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