| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2411 |
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| Symbol | gyrA |
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| ID | 1170127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2515879 |
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| End bp | 2518638 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344245 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | NP_718001 |
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| Protein GI | 24373958 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC TGGCATCATC TATTTCGCCA ATTAATATCG AAGACGAACT AAAGAATTCG
TACCTTGATT ACGCCATGAG CGTCATCGTG GGACGTGCAT TACCAGACGT GCGTGATGGC
CTTAAGCCTG TGCATCGCCG CGTGCTGTTT GCCATGAGTG AATTGAAGAA CGATTGGAAC
AAGCCGTACA AAAAGTCTGC CCGTGTGGTC GGTGACGTGA TCGGTAAATA TCACCCCCAT
GGTGACTCGG CGGTATACGA TACTATCGTA CGTATGGCTC AGCCTTTCTC ACTGCGTTAC
ACCTTAGTCG ATGGTCAAGG AAACTTCGGT TCGGTTGACG GTGACTCAGC AGCGGCAATG
CGTTACACCG AAATCCGTAT GGATAAGTTA GCGCACCAGC TCCTCGCCGA TCTTGAAAAA
GAAACCGTTG ACTATGTGCC AAACTACGAC GGCACCGAAC AAATTCCTGC GGTATTACCG
ACACGCGTCC CTAACCTGTT GATTAACGGT TCATCGGGTA TTGCAGTTGG TATGGCAACG
AACATCCCAC CGCACAACTT AACCGAAGTG GTTAAAGGCT GTTTAGCGCT GATCGCTGAT
CCTGCGTTGT CGATTGAACA GCTGATGGAC TATATTCCAG GCCCCGATTT CCCAACTGCA
GCGATTATCA ATGGCCGTAA GGGCATTATT GATGCCTATA AAACCGGCCG TGGCCGTGCC
ATCATGCGTG CACTGGCTGA GGTGGAAACG GAAGAGAATG GCCGTGAACG CATTATCGTC
ACTGAAATCC CGTATCAAGT AAACAAAGCC CGTTTAATTG AGAAGATTGC CGAGCTGGTT
AAAGATAAAA AGCTTGAAGG CATTAGCGGT CTGCGCGACG AGTCTGACAA AGACGGTATG
CGCATCGTTA TTGAAATTAA ACGCGGTGAA GTGGGTGAAG TTGTCCTAAA CAACCTCTAT
GCTCAAACGC AAATGCAGTG CTCTTTTGGT ATCAACATGG TGGCGTTGAC TAATGGTCAG
CCGAAGTTGT TCAACTTAAA AGAAATGCTC GAGTGCTTTA TTCTGCACCG CCGTGAAGTG
GTAACACGCC GCACCGTATT TGAACTGCGT AAAGCGCGCG AGCGCGCCCA TATCCTTGAG
GCATTAGCGG TCGCACTGGC CAACATCGAT CCGATTATTG CGCTGATCAA AGCCTCGCCA
ACTCCAGCTG ACGCTAAAGT TAAATTGGTT GAACAGGGCT GGGCGCTCGG TCATGTGCAA
GGCATGCTTG AAAAAGCCGG TGACGATGCA GCACGTCCTG AGTGGTTAGA GCCAGAATAT
GGTATCCGCG ATGGCTTATA TTATCTGACT GAGCAACAGG CTCAGGCGAT CCTTGAGCTG
CGCTTACACC GTTTAACTGG GCTTGAGCAC GATAAGATCA TCGCTGAATA CGAAGAGCTG
CTCGAGTTTA TCGCAGGTCT GCTGTTTATT TTGCGCAGCC CTGAGCGTTT AATGGAAGTG
ATCAAAGAAG AGTTGGAAGA AATTCTAGCT GAATACGGCG ATGCCCGCCG CACAGTGATT
AACGCCAACG AAATTGATAT GAGTCTTGAA GACTTAATCA ACGAAGAAGA CGTGGTAGTA
ACCTTGTCAC ACTTAGGTTA TGCCAAGTAT CAACCACTGA GCGATTATCA AGCTCAGCGC
CGTGGTGGTA AAGGCAAAGT TGCAACGAAA GTGAAAGATG AAGATTTCGT TGAAAAACTG
CTGGTTGCCA ATACCCACGA CACCATTTTG TGCTTCTCTG ACTTCGGTAA GATGTACTGG
CTCAAAGTCT ATCAATTACC GCTGGCGAGC CGCACTTCCC GTGGTCGTCC AATTGTTAAC
CTGCTGCCGC TGGCTGATGG CGAGCGCATT ACTGCGATTC TACCGGTACG CGAATACGCC
GAAGATAAAT ACATCATCAT GGCAACCTCT AACGGTACCG TGAAGAAAAC TGCATTGACG
GCCTACAGCA ACCCACGTGC AAACGGTATT ATCGCTGTTA ACCTCAAAGA CGGTGACCAA
CTGATCGGTG TCGATATCAC CAATGGTGAT GATGAGATCA TGCTGTTCTC GAATGAAGGT
AAAGTGGTTC GCTTTAAAGA AGGCGAAGAA GTGGCCGTCC TCGATGAAAA CGGCAACCCA
GTGCTAGATG AAGAAGGCAA CCCACAGATT AACTTCAAGG GCGTGCGTCC AATGGGTCGT
GGCGCGACGG GTGTTCGTGG TATCAAGCTT GAAGAAGGTC AAAGAGTGGT GTCTCTTATC
GTGCCTAAGG ACGATGGCGC TATCTTAACT GTGACCGAAA ACGGCTATGG TAAACGTACT
GAGCTGTCTG AATATCCATC GAAGAGCCGC GCGACGAAAG GTGTGGTATC GATCAAGGTG
AGCGAACGTA ACGGTGCTGT CGTTGGTGCG GTACAAGTGG GCGGCAATGA CGAAATCATG
CTGATCAGCG ACAAGGGCAC TTTAGTGCGT ACGCCAGCTA ATGGTGTGTC TATCATTGGC
CGTAACACAC AAGGCGTGAC CATTATTCGT ACCGCAAGTG ACGAGAAAGT GGTTGGTCTG
CAACGTATCG ATGAGATCCA AGGCGACGAA GATGAAGTCG AGCTGGATGA AAACGGTATG
CCAATCGCCC CAGTTATCGC TGAAGGTGAC TCTGTTCAAG AAGAGCCTTT AGAGGAAGAG
GATGAGCTGG AAGAATTAGA CGAAGACGAA GAGCTTGACG ACGAGCAAGA CGAAGACTAA
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| Protein sequence | MTDLASSISP INIEDELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMSELKNDWN
KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY TLVDGQGNFG SVDGDSAAAM
RYTEIRMDKL AHQLLADLEK ETVDYVPNYD GTEQIPAVLP TRVPNLLING SSGIAVGMAT
NIPPHNLTEV VKGCLALIAD PALSIEQLMD YIPGPDFPTA AIINGRKGII DAYKTGRGRA
IMRALAEVET EENGRERIIV TEIPYQVNKA RLIEKIAELV KDKKLEGISG LRDESDKDGM
RIVIEIKRGE VGEVVLNNLY AQTQMQCSFG INMVALTNGQ PKLFNLKEML ECFILHRREV
VTRRTVFELR KARERAHILE ALAVALANID PIIALIKASP TPADAKVKLV EQGWALGHVQ
GMLEKAGDDA ARPEWLEPEY GIRDGLYYLT EQQAQAILEL RLHRLTGLEH DKIIAEYEEL
LEFIAGLLFI LRSPERLMEV IKEELEEILA EYGDARRTVI NANEIDMSLE DLINEEDVVV
TLSHLGYAKY QPLSDYQAQR RGGKGKVATK VKDEDFVEKL LVANTHDTIL CFSDFGKMYW
LKVYQLPLAS RTSRGRPIVN LLPLADGERI TAILPVREYA EDKYIIMATS NGTVKKTALT
AYSNPRANGI IAVNLKDGDQ LIGVDITNGD DEIMLFSNEG KVVRFKEGEE VAVLDENGNP
VLDEEGNPQI NFKGVRPMGR GATGVRGIKL EEGQRVVSLI VPKDDGAILT VTENGYGKRT
ELSEYPSKSR ATKGVVSIKV SERNGAVVGA VQVGGNDEIM LISDKGTLVR TPANGVSIIG
RNTQGVTIIR TASDEKVVGL QRIDEIQGDE DEVELDENGM PIAPVIAEGD SVQEEPLEEE
DELEELDEDE ELDDEQDED
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