Gene SO_2410 details

Gene Information

• Locus tag: SO_2410
• Symbol: serC
• ID: 1170126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2514676
• End bp: 2515779
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637344244
• Product: phosphoserine aminotransferase
• Protein accession: NP_718000
• Protein GI: 24373957
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG1932] Phosphoserine aminotransferase
• TIGRFAM ID: [TIGR01364] phosphoserine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGTGA GCGCGATTTA TAATTTCTGT GCAGGTCCTG CGATGTTACC CGCAGCGGTG 
ATGAAAAAAG CACAACAGGA ATTACTCGAT TGGAATGGGC TAGGTGTCTC CGTGATGGAA 
GTCAGCCACA GAGGTAAGGA ATTTATCGCG CTGACCAAGC AAGCTGAGGC GGATTTACGC 
GAGCTGATGC ATATTCCACA AAACTATCAT GTGCTCTTTA TGCATGGCGG TGGTCGTGGT 
CAGTTCTCTG CCGTTGTGAA TAATTTTTTA GGCAACCAAG GCCGAGCCCT GTATTTAGTC 
AGTGGTCAAT GGTCTTCTGC AGCATTAGCT GAAGCGCAAA AGCTGGCGGG AGACGCGCAA 
ATTGATAGTC TGAATATTGT TGAAAAACAT AATTGCCTCA ATGCGGTAGT GCTGCCTGAT 
CTGCATAAGA TTGATGCCGA TTACCGTTAT GTGCACTACT GCCCCAATGA GACAGTTGAT 
GGTATCGAAA TTTTTGATGA GTTAGACAGT CCATGGCCAA TTGTTGCCGA TTTATCGTCA 
ACCATTATGT CGCGTGAAAT TGATGTTAGT CGTTATGGTT TAATCTATGC CGGCGCACAA 
AAGAACATAG GTCCATCGGG CTTATCCATC GTGATCGTGC GCGATGACAT GTTAACACTG 
CCGAGTTTAC CGCAATCATC CATTATGGAT TATCGTTTAG CGGTGGAGCA TGATTCGATG 
TTTAACACGC CGCCGACCTT TGCCTGGTAT TTAGCGGCCG AAGTGTTTGC TTGGCTTAAA 
TCGATTGGTG GTGTGGCGAG TATCGCGAAA ATCAATCAGC AAAAAGCGCA AATGCTGTAT 
GCCTGTATCG ACGCCAATCC TTTCTATAAA AATGGTGTGG TGGCTGCGAA CCGCTCACAG 
ATGAATGTGA CCTTTCAACT GGCTGATGAA TCCCTTGATG GCGCTTTCTT AAAAGAAGCC 
GAAGCGGTGG GCTTAGTGGC TTTAAAAGGG CACAGAATCG TCGGTGGTAT GCGTGCAAGC 
CTTTACAATG CAATGCCACT GGAAGGCGTT GCCGCGCTGG TAACATTTAT GAACGAGTTT 
GCGGCTAAAC ATTACAACAT TTAG 

 

Protein sequence

MAVSAIYNFC AGPAMLPAAV MKKAQQELLD WNGLGVSVME VSHRGKEFIA LTKQAEADLR 
ELMHIPQNYH VLFMHGGGRG QFSAVVNNFL GNQGRALYLV SGQWSSAALA EAQKLAGDAQ 
IDSLNIVEKH NCLNAVVLPD LHKIDADYRY VHYCPNETVD GIEIFDELDS PWPIVADLSS 
TIMSREIDVS RYGLIYAGAQ KNIGPSGLSI VIVRDDMLTL PSLPQSSIMD YRLAVEHDSM 
FNTPPTFAWY LAAEVFAWLK SIGGVASIAK INQQKAQMLY ACIDANPFYK NGVVAANRSQ 
MNVTFQLADE SLDGAFLKEA EAVGLVALKG HRIVGGMRAS LYNAMPLEGV AALVTFMNEF 
AAKHYNI