| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2404 |
|---|
| Symbol | aroA |
|---|
| ID | 1170121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2507736 |
|---|
| End bp | 2509016 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637344239 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | NP_717994 |
|---|
| Protein GI | 24373951 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT TACGTCTTGA ACCTGTTGTG CAAGTCCGTG GTGAGATTAA TATTCCCGGC
TCGAAAAGTA TTTCAAACCG TGCCTTGCTC TTGGCGACCT TAGCCCAAGG CACGACTACG
CTCACCAATT TGCTTGACTC AGATGATATT CGCCATATGC TGGCTTCCCT TAAGCAATTA
GGGGTTGAGT ATCGTTTATC CCATAACAAT ACCGTGTGCG AACTGGCCGG ATTAGGGGGC
GTGATGTCAT CGAAGCAGGC GCAAACTCTA TTTTTAGGCA ATGCCGGTAC GGCCATGCGC
CCGCTATGCG CCGCATTAAC CTTAGGCCAA GGTGAGTTTA CCTTAACCGG CGAGCCACGC
ATGGAAGAAC GTCCGATAGG CGATCTGGTC GATGCCTTAA GACAATTGGG TGCTAATATT
GTTTATCTTA AAAATGATGG TTTCCCGCCA TTAACCATTA ATGCGACAGG CCTTAATGGT
GGTGATGTGG AAATTGTCGG GGATCTCTCA AGCCAATTTT TAACCGCGTT ATTGATGGTC
GCGCCGCTTG CTAAGGGTAG TGTGAATATC CATGTCAAAG GCGAGTTAGT CTCTAAACCC
TATATTGATA TCACGTTGGC GTTGATGGCA CAGTTTGGGG TTAAGGTCAT CAATCATCAT
TACGCTCGCT TTGAGATCCC TGCTGGTCAG CATTATGTGT CACCGGGTAA AGTACTGGTT
GAAGGGGATG CATCCTCTGC ATCGTACTTT TTAGCCGCAG GTGCAATCAA AGGCGGTGAG
GTGAAAGTCA CAGGTGTGGG GCGTTTAAGC ATTCAGGGCG ATGTGAAATT TGCCGATGTG
CTGGAAAAAA TGGGCGCCGA TATTGAGTGG GGCGATGACT ACATTATTGC CCGCGGTGCA
CCGTTAACTG CGGTTGATTT AGATATGAAC CATATTCCCG ATGCGGCCAT GACCATTGCA
ACGGCCGCAT TATTTGCTAA AGGCACGACA GTTATTCGCA ATATCTACAA CTGGCGCATC
AAAGAGACTG ATCGCTTAGC TGCTATGGCA ACTGAGTTGC GTAAAGTCGG CGCTGAGGTA
GAAGAAGGCA ATGACTACAT AAAGATCACT CCGCCTGCGG TACTGAATAC TGCGCAGATA
GATACCTATA ACGACCATCG TATGGCCATG TGCTTCTCCA TGCTAGCGTT TGCCGACTGT
GGTATCACCA TCAATGATCC CGATTGCACC TCAAAAACCT TCCCTGACTA TTTTGTTCAA
TTCGCCAGCC TCAAGGTCTA A
|
|---|
| Protein sequence | MKQLRLEPVV QVRGEINIPG SKSISNRALL LATLAQGTTT LTNLLDSDDI RHMLASLKQL
GVEYRLSHNN TVCELAGLGG VMSSKQAQTL FLGNAGTAMR PLCAALTLGQ GEFTLTGEPR
MEERPIGDLV DALRQLGANI VYLKNDGFPP LTINATGLNG GDVEIVGDLS SQFLTALLMV
APLAKGSVNI HVKGELVSKP YIDITLALMA QFGVKVINHH YARFEIPAGQ HYVSPGKVLV
EGDASSASYF LAAGAIKGGE VKVTGVGRLS IQGDVKFADV LEKMGADIEW GDDYIIARGA
PLTAVDLDMN HIPDAAMTIA TAALFAKGTT VIRNIYNWRI KETDRLAAMA TELRKVGAEV
EEGNDYIKIT PPAVLNTAQI DTYNDHRMAM CFSMLAFADC GITINDPDCT SKTFPDYFVQ
FASLKV
|
|---|
| |