Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2402 |
Symbol | rpsA |
ID | 1170119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2505090 |
End bp | 2506757 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344237 |
Product | 30S ribosomal protein S1 |
Protein accession | NP_717992 |
Protein GI | 24373949 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTC AAACTCTGGA GTTTCGTCCA GGCTCTATCG TTCGTGGTAC TGTAGTTGCT ATCGAAAACG GTATGGTTTT GGTTGATGCA GGTCTGAAGT CTGAAAGCCC AATCCCAGCT GAACAATTCA AAAACGCTCA AGGCGTTTTA GAAATCGCTG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA CGGCTTCGGT GAGACTCAAC TGTCTCGCGA AAAAGCGAAA CGTCACGAAG CTTGGATCGT TCTGGAAAAA GCTTACGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAAGTGAA AGGCGGTTTC ACTGTTGAAT TAAACGGTAT CCGTGCCTTC TTACCAGGTT CTCTAGTTGA TGTGCGCCCA GTTCGCGACA CCGCTCACTT AGAGTACAAA GAATTAGAAT TCAAAGTTAT CAAACTAGAC CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCAGA AAGCAGCGCT GAGCGTGATG CACTGTTAGA AAACCTGCAA GAAGGTCAAG CAGTTAAAGG TATCGTTAAG AACCTGACTG ACTACGGTGC ATTCGTAGAT TTAGGTGGCG TTGACGGTCT GTTACATATC ACTGATATGG CATGGAAACG CGTTAAGCAC CCATCTGAAA TCGTAAATGT TGGTGACGAA ATCAACGTTA AAGTTCTGAA GTACGATCGT GAGCGCACTC GTGTATCTCT AGGTCTGAAA CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAGCGCT ACCCAGAAAA CACTAAGTTA ACTGGTCGCG TAACTAACCT GACTGACTAC GGCTGTTTCG TTGAAATCGA AGAAGGCGTT GAAGGTTTAG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATCCA CCCATCTAAA GTGGTTAACT TAGGTGATGA AGTTGAAGTT CTGGTTCTGG ACATCGATGA AGAGCGTCGT CGTATTTCTC TAGGTCTGAA GCAATGTAAG ACCAACCCAT GGGATGACTT CGCAACTCGT TACAACAAAG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTC ATCGGTCTTG ACGGCGGTAT CGATGGTTTA GTTCACCTGT CTGACATTTC TTGGAACGGC ACTGGCGAAG ACGCAGTATC TGAGTACAAG AAAGGCGACG AAATCCACGC AGTGGTTCTG TCTGTTGACC CAGAGCGTGA GCGTATCAGC TTAGGTGTTA AACAAACTGA AGACGACCCA TTCAACGCTT ACTTAGCTGA CAAGAAGAAA GGTACTATCG TACACGGTAC TGTTTCTGCT GTTGATGCTA AAGGTGTGAC TGTTGAACTG GCTGACACTG TTGAAGGTTA CATCCGTGTA GCTGACATCA GCCGTGAGCG CATCGAAGAT GCATCTACTG TTTACTCTGT AGGTGACGCT ATCGAAGCTA AGTTCATGGG TGTTGACCGT AAGAACCGTT CTATCAGCCT GTCAATCAAA GCGAAAGACG AAGCTGAAGA AAAAGAAGTG ATGGCGACCT TGAATAAACA AGAAGACGCT GTTATTAGTA ATGCAATGGC TGAAGCGTTT AAAGCAGCTC GCAAATAA
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Protein sequence | MTESFADLFE QSLQTLEFRP GSIVRGTVVA IENGMVLVDA GLKSESPIPA EQFKNAQGVL EIAVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF TVELNGIRAF LPGSLVDVRP VRDTAHLEYK ELEFKVIKLD QKRNNVVVSR RAVIESESSA ERDALLENLQ EGQAVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTKL TGRVTNLTDY GCFVEIEEGV EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFATR YNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVSEYK KGDEIHAVVL SVDPERERIS LGVKQTEDDP FNAYLADKKK GTIVHGTVSA VDAKGVTVEL ADTVEGYIRV ADISRERIED ASTVYSVGDA IEAKFMGVDR KNRSISLSIK AKDEAEEKEV MATLNKQEDA VISNAMAEAF KAARK
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