| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2398 |
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| Symbol | pyrF |
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| ID | 1170115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2502432 |
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| End bp | 2503127 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344233 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | NP_717988 |
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| Protein GI | 24373945 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACTA AACCTATCCT CGTAGCGCTT GATTACGATA ATAAAAACCA TGCTTTACAA
TTGATAGATC AACTCGATCC CAACATGTGT CGCCTGAAAG TCGGCAAAGA AATGTTTACC
CTGTTTGGCC CACAACTGGT GAAAGATATC CACGAACGTG GCTTTGATCT TTTCCTTGAC
TTAAAGTTTC ACGATATTCC CAATACTGTT GCTAAAGCAG TCACTGCTGC AGCGGAACTT
GGCGTGTGGA TGACAAACGT CCATGCCAGC GGTGGCTTGG CCATGATGGA AGCGGCAAAA
AAGGCTTTGC AGCCATACGG TAAAGAGGCG CCAATGCTGA TTGCCGTGAC GGTATTAACC
TCAATGAGCG ATGAAGACCT TAAATTGATA GGTATTGATG TGCCTGCATT TGAGCATGTT
CAGCGTTTAG CTAAATTGAC TAAACAGGCA GAACTTGATG GTGTTGTCTG TTCGGCCCAA
GAGGCGAGCA TACTTAAGTC ACTATTAGGT CAAGACTTTA AATTGATTAC CCCAGGCATT
CGACCTGTCG GTAGTGATGT TGGTGACCAA CACCGCGTGA TGACGCCGCC TGAGGCGCTT
GCCGCCGGTG CTGATTATTT AGTGATTGGT CGTCCGATCA CTAAGGCGAC TGATCCTCTG
GCTGCGCTGC AGGCCATTCA CCAGTCATTG GTTTAG
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| Protein sequence | MTTKPILVAL DYDNKNHALQ LIDQLDPNMC RLKVGKEMFT LFGPQLVKDI HERGFDLFLD
LKFHDIPNTV AKAVTAAAEL GVWMTNVHAS GGLAMMEAAK KALQPYGKEA PMLIAVTVLT
SMSDEDLKLI GIDVPAFEHV QRLAKLTKQA ELDGVVCSAQ EASILKSLLG QDFKLITPGI
RPVGSDVGDQ HRVMTPPEAL AAGADYLVIG RPITKATDPL AALQAIHQSL V
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