| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2389 |
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| Symbol | emrD |
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| ID | 1170106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2492556 |
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| End bp | 2493800 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344224 |
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| Product | multidrug resistance protein D |
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| Protein accession | NP_717979 |
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| Protein GI | 24373936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCAG GCGAAAAACC GTCTTTAATC TCAGCAAAAG CGTCAACTCC ATCAGCAGGA
AGTGCCACTC GATTGCTCTT TATGCTGGTC TTTATGGTTG CCTGCGGACA GATGGCCCAA
ACGATTTTTG TGCCAGCGCT CCCGCTGATT GCCCAAGGCT TAGCCGTTGA TGCAAGCAAG
CTACAAGCAG TCATGGCCTG TTATCTACTT GCCTACGGCT TATTTCAATT TATCTATGGC
CCATTATCTG ACCGATATGG CCGTAAACTC CCACTGCTGA TTGGTATTGG GATCTTTATA
ATTGGCGCGT TACTGGCCAC ACAAGCCACA AGCTTTAATC AGTTAATTTG CGCAAGTCTG
CTCCAAGGCC TCGGTACAGC CAGTGCGGGC GCCCTGTGCC GCAGCATTCC AAGGGATCAT
TATTTTGGTG ATAACTTATT AAAATTTAAC AGTTATGTGT CCATGGCAGT GGTATTTCTT
CCCTTGGTAG CGCCCTTTTT AGGCAGCCTC GCTTCAGCTT ACTTCGGTTG GCAAGCCGTT
TATTGGGTTT TATTTGGATT CGGTGTCTTT GTTTGGCTAC TGCTTTGTTT TGGCTTTAAA
GAATCTTTAC CAAAGGACAA ACGAGAGCAA CAACCGGTAT TAGCCTCCTA TCGCCATGTG
TTACGCCATC GCAGCTTTAG GGCATATCTA TTTTCATTAA TCGCCACCTT TGCGGGCATT
GCCGCCTTTG AAGCCATTGC GGGCGTACTC TATGGCCAAT ATCTGCAATT AACGCCCTTT
ATGGTGAGCT GTTATTTTGT GGCGCCTATC CCAGGCTATT TACTCGGCGC ACTGATTGCG
GGTAGACAAA AACAAGCACA ACGCTCGGTA TTCCAAGGTG TAGCTTTGCT CGGCGCTGGT
GCGCTGTTTA TGTTGATCCC TGGGCTGTTT CAACTGGTCG TCGGCTGGAG CTTATTGGTT
GGTTCGATTC TGTTTTTTAG TGGTGCGGGC ATGCTATTCC CTACATTAAC CTCAGCTGCG
TTAGAACCTT TTCCGCGTCA AGCGGGAATT GCGGGGGCTT TGCTGGGTGG TTTACAAAAC
TTTGGGGCAG GACTGGCGGC ATTAACCATG TCGCTCGTGC CTATGGGAGG TCAGTTAAGT
ATCGGTTTAC TGAGCGCTGT GATGGTGCTT TTAGTGATTG TGGCCTTGCA TTATGCGCGG
GATCAAAACG ATACCCATCA AACGCTATTG CCGCAAAAAA CTTAA
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| Protein sequence | MMSGEKPSLI SAKASTPSAG SATRLLFMLV FMVACGQMAQ TIFVPALPLI AQGLAVDASK
LQAVMACYLL AYGLFQFIYG PLSDRYGRKL PLLIGIGIFI IGALLATQAT SFNQLICASL
LQGLGTASAG ALCRSIPRDH YFGDNLLKFN SYVSMAVVFL PLVAPFLGSL ASAYFGWQAV
YWVLFGFGVF VWLLLCFGFK ESLPKDKREQ QPVLASYRHV LRHRSFRAYL FSLIATFAGI
AAFEAIAGVL YGQYLQLTPF MVSCYFVAPI PGYLLGALIA GRQKQAQRSV FQGVALLGAG
ALFMLIPGLF QLVVGWSLLV GSILFFSGAG MLFPTLTSAA LEPFPRQAGI AGALLGGLQN
FGAGLAALTM SLVPMGGQLS IGLLSAVMVL LVIVALHYAR DQNDTHQTLL PQKT
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