| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2388 |
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| Symbol | ampC |
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| ID | 1170105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2491006 |
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| End bp | 2492211 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344223 |
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| Product | beta-lactamase |
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| Protein accession | NP_717978 |
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| Protein GI | 24373935 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATCT CTCCATTAAA TTCACATACG TTAGGCTCAA CCAGCCTTGG GTTAATTTTG
CTTGTAGCAC CATTGATGGT GCATGCCACC CCACAAAATG CCTTAACCGC CTCCCAAGAC
ACTAAGACAA TAAAAAGTAT TGTCGATTCT GCGGTTAACC CCTTGATGGC CGAATATGGG
ATCCCAGGGG CTGTGCTCGG GATCAGTATG AACGGGCAGC AATACTTCTT TCCCTATGGC
GTCAGTTCAA AAAATACAGC TGAAAAAGTC AGTAAAAATA CCCTATTTGA GATTGGTTCT
ATCAGTAAAA CCTTTACCGC GACCCTCGCA ACATACGCTC AATTTGAGGG TAAACTGACG
CTGACAGATA AGGTCAGCCA ATATCTGCCC GAATTAGCTG GTAGCCATTT TGACCAGATT
AATCTCATTA ATTTAGCCAC CCATACTGCG GGCGATCTGC CTATGCAAGT GCCCGATAAT
GTCACCAATA ACACTGAATT AATAAGCTAT TTTAAAGCCT GGCAACCCGC CTATCCCGCT
GGTACACATC GAAATTATGC CAATCCCAGC ATTGGCCTTC TCGGTGTGAT CGCGGCAAAG
CAACTTGGTC AAGGCTTTCC TGAGGCAGTA GAGCAAACTC TCTTTCGACA ACTTGGTATG
ACAAACAGCT ATCTTATGGT TCCAACGAAT AAAATGGCTG ATTATGCCCA AGGCTACAAT
AAGCAAGATC AGCCAGTACG CCTCAATCCA GGTGTGTTAG CCGATGAGGC CTACGGAATA
AAAACGACGG CAGTGGATCT ACTCCGCTTT GTTGAAACCA ATATGCAGCA GCATTCGGTG
CCAGCAAGGT TGCAACGTGC CATTGATGCC ACCCATACGG GCTATTTTGA TGTAGGCCCG
ATGACTCAAG AGATGATTTG GGAGCACTAT CCCTATCCGA TTAGCCTTGA TAACCTCCTT
GCTGGACATA CTCAAGACGT TGTGTTTGGC AGCATGCCAG TGAAAGCCAT CACACCACCC
CAATCGCCAC AGCAAAATGT CTGGATAAAT AAGACTGGCT CAACTGGCGG TTTTGCCGCC
TATGTGGCTT ATATTCCAGC TAAAAAGCTG GCAATGGTGT TATTGAGTAA TAAAAATTAT
CCTGTGCCGC CACGGGTGAC TGTGGGATAC CAGATATTAA CTGGCTTAGA AAAGCTCCCA
AACTGA
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| Protein sequence | MTISPLNSHT LGSTSLGLIL LVAPLMVHAT PQNALTASQD TKTIKSIVDS AVNPLMAEYG
IPGAVLGISM NGQQYFFPYG VSSKNTAEKV SKNTLFEIGS ISKTFTATLA TYAQFEGKLT
LTDKVSQYLP ELAGSHFDQI NLINLATHTA GDLPMQVPDN VTNNTELISY FKAWQPAYPA
GTHRNYANPS IGLLGVIAAK QLGQGFPEAV EQTLFRQLGM TNSYLMVPTN KMADYAQGYN
KQDQPVRLNP GVLADEAYGI KTTAVDLLRF VETNMQQHSV PARLQRAIDA THTGYFDVGP
MTQEMIWEHY PYPISLDNLL AGHTQDVVFG SMPVKAITPP QSPQQNVWIN KTGSTGGFAA
YVAYIPAKKL AMVLLSNKNY PVPPRVTVGY QILTGLEKLP N
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