Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2387 |
Symbol | |
ID | 1170104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2489753 |
End bp | 2490508 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344222 |
Product | hypothetical protein |
Protein accession | NP_717977 |
Protein GI | 24373934 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTTG CCCCACACGC TGTACATCGC TTATATGAAT ACCGCAAATC CATTTCGACT AAACCTTTTG GCGCTCGTGG TAAAAAACTC ATTCGCTGCC CCTTGTGTTT ATTAGGCGAG CAATTTTGTA CCTGCTCGCT GCGAAAGCAG TTAACCACTC AGGCTAGCTT TCTGCTTATC ATGTATAACG ATGAGGTCCT TAAGCCAACA AATAGTGGCC GTTTGATTGC AGATCTTATC CCCGATACCC ACGCGTTTCT TTGGTCGCGC ACCGATCCTG CTCCAGAGTT ACTTGCACTT TTAAGCAGCG ACCATTATCA GCCGTTTTTA GTGTTTCCGG CACAATATGC GGACCAAGGC CAAACCGTTT TAAGCCAAGT CCCTATGGCC ACGCTTGCCA AAGGTAAACG TCCCTTGCTG ATTATGCTCG ATGGCAGTTG GCGAGAAGCC ATTAAGATGT TTCGTAAGAG TCCTTATTTG CAGGGCTTGC CTATCTTGTC TTTTGATCCT GATACTTTAG CCACTTACGC ACTACGTAAG GGGAGTCACG ATTTTCAACT GGGAACGGCA GAAGTCGCGT CACTTGCATT GGCTGCGATG GGAGAAGAGG CAAATGGTAA AGCATTAACG GCATGGTTCG ACCTGTTTGT GGAGTCATCA TTACTGGGGC GAAATCGTCG CTGCCGTGAA GATATTCTCC CGATTAGTGA TTTTACCAAT GCCTTTGAAG TGGCTTATAC CGCTGCAACG CCTTAG
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Protein sequence | MALAPHAVHR LYEYRKSIST KPFGARGKKL IRCPLCLLGE QFCTCSLRKQ LTTQASFLLI MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TDPAPELLAL LSSDHYQPFL VFPAQYADQG QTVLSQVPMA TLAKGKRPLL IMLDGSWREA IKMFRKSPYL QGLPILSFDP DTLATYALRK GSHDFQLGTA EVASLALAAM GEEANGKALT AWFDLFVESS LLGRNRRCRE DILPISDFTN AFEVAYTAAT P
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