Gene SO_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2387 
Symbol 
ID1170104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2489753 
End bp2490508 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content48% 
IMG OID637344222 
Producthypothetical protein 
Protein accessionNP_717977 
Protein GI24373934 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTTG CCCCACACGC TGTACATCGC TTATATGAAT ACCGCAAATC CATTTCGACT 
AAACCTTTTG GCGCTCGTGG TAAAAAACTC ATTCGCTGCC CCTTGTGTTT ATTAGGCGAG
CAATTTTGTA CCTGCTCGCT GCGAAAGCAG TTAACCACTC AGGCTAGCTT TCTGCTTATC
ATGTATAACG ATGAGGTCCT TAAGCCAACA AATAGTGGCC GTTTGATTGC AGATCTTATC
CCCGATACCC ACGCGTTTCT TTGGTCGCGC ACCGATCCTG CTCCAGAGTT ACTTGCACTT
TTAAGCAGCG ACCATTATCA GCCGTTTTTA GTGTTTCCGG CACAATATGC GGACCAAGGC
CAAACCGTTT TAAGCCAAGT CCCTATGGCC ACGCTTGCCA AAGGTAAACG TCCCTTGCTG
ATTATGCTCG ATGGCAGTTG GCGAGAAGCC ATTAAGATGT TTCGTAAGAG TCCTTATTTG
CAGGGCTTGC CTATCTTGTC TTTTGATCCT GATACTTTAG CCACTTACGC ACTACGTAAG
GGGAGTCACG ATTTTCAACT GGGAACGGCA GAAGTCGCGT CACTTGCATT GGCTGCGATG
GGAGAAGAGG CAAATGGTAA AGCATTAACG GCATGGTTCG ACCTGTTTGT GGAGTCATCA
TTACTGGGGC GAAATCGTCG CTGCCGTGAA GATATTCTCC CGATTAGTGA TTTTACCAAT
GCCTTTGAAG TGGCTTATAC CGCTGCAACG CCTTAG
 
Protein sequence
MALAPHAVHR LYEYRKSIST KPFGARGKKL IRCPLCLLGE QFCTCSLRKQ LTTQASFLLI 
MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TDPAPELLAL LSSDHYQPFL VFPAQYADQG
QTVLSQVPMA TLAKGKRPLL IMLDGSWREA IKMFRKSPYL QGLPILSFDP DTLATYALRK
GSHDFQLGTA EVASLALAAM GEEANGKALT AWFDLFVESS LLGRNRRCRE DILPISDFTN
AFEVAYTAAT P