| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2373 |
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| Symbol | |
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| ID | 1170092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2477741 |
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| End bp | 2479012 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637344210 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | NP_717963 |
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| Protein GI | 24373920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CTAGTAACAT CTTTGTAAAT ATGAAGTTTT TTATATTTTT ACTCTATTTA
GCTCTCTTAA GTATGTTGGG CTTTATTGCC ACCGACATGT ATTTACCTGC TTTCAAAGCA
ATTGAAAGTT CGTTAAATTC TTCACCCTCG CAAGTGGCGA TGTCGTTGAC CTGTTTCCTT
GCAGGCTTGG CACTTGGGCA ACTTATCTAT GGGCCTTTAG TCAGCAAACT CGGCAAGCGT
TATGCTCTGC TCATTGGGTT GGCAGTTTTT GCTTTATCGA GCGTAGCCAT CGCCAATAGT
GACTCGGTAA TGATGTTGAA TATTGCCCGC TTTTTCCAAG CCATTGGCGC CTGCAGTGCT
GGCGTAATTT GGCAAGCTAT CGTTGTTGAA CAATATGATG CAGAAAAAGC ACAGGGGATC
TTCAGCAATA TTATGCCGTT AGTTGCACTG TCACCCGCGT TAGCACCGAT CTTAGGCGCT
TATATTCTGA ACGAATTTGG ATGGCGTGCA ATATTTATCT CATTGTGTGT GATTGCTTTT
TTACTCGTTT TGATGACCTT GTACTTTGTG CCAGGTAAAT CAAAACACCA AGATATCAAG
CCTAGCGCTG TTTCCTATGG GCAAATTTTG AAAAATACTC GCTATTTAGG CAATGTGGTG
ATTTTTGGTG CGTGTTCAGG TGCATTTTTT GCCTACCTGA CCGTATGGCC GATTGTGATG
GAGCAGCATG GTTATCAAGC AACCGAAATT GGCCTTAGCT TTATCCCACA AACCATTATG
TTTATTGTCG GTGGTTATGC GAGTAAGTTA TTGATAAAAC GCATTGGAGC AGATAAAACC
CTTAATGTAT TGCTGTCTAT TTTTGGGATT TGTGTTGTCT CGATCGTGTT ATTTACCTTG
CTATTTAAAA CAATAACCAT TTTCCCACTA CTTATTTCAT TCTCAATCTT AGCGGCGGCG
AACGGAGCTA TTTATCCGAT AGTGGTGAAT AGTGCCTTGC AGCAATTTAC CCAGCATGCT
TCTAAAGCTG CGGGGTTACA AAACTTTTTG CAGATCACCA TCGCTTTCGG GGCCTCTAGT
TTAGTGGCCA TGTGGGCCAA TTTTGGTGAA GTAGCCATAG GTTGGGGCAT TCTATGCTGT
TCACTGCTGG TTATCCTAGG TTATGTACTT AAAACAGAAC AGACATGGGG AGATTTTGCT
CATCACTTTA CTGCACCAGA TCCTGCTCGA GTAGGAATCG TTGCAAATGC GAAGCAAAAT
CAAGCAGATT GA
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| Protein sequence | MKTSSNIFVN MKFFIFLLYL ALLSMLGFIA TDMYLPAFKA IESSLNSSPS QVAMSLTCFL
AGLALGQLIY GPLVSKLGKR YALLIGLAVF ALSSVAIANS DSVMMLNIAR FFQAIGACSA
GVIWQAIVVE QYDAEKAQGI FSNIMPLVAL SPALAPILGA YILNEFGWRA IFISLCVIAF
LLVLMTLYFV PGKSKHQDIK PSAVSYGQIL KNTRYLGNVV IFGACSGAFF AYLTVWPIVM
EQHGYQATEI GLSFIPQTIM FIVGGYASKL LIKRIGADKT LNVLLSIFGI CVVSIVLFTL
LFKTITIFPL LISFSILAAA NGAIYPIVVN SALQQFTQHA SKAAGLQNFL QITIAFGASS
LVAMWANFGE VAIGWGILCC SLLVILGYVL KTEQTWGDFA HHFTAPDPAR VGIVANAKQN
QAD
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