Gene SO_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2340 
Symbol 
ID1170063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2447554 
End bp2448531 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content50% 
IMG OID637344177 
Productalpha keto acid dehydrogenase complex, E1 component, beta subunit 
Protein accessionNP_717930 
Protein GI24373887 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGAAA TGAATATGTT ACAGGCCGTC AATGAGGCCT TGTCGATTGC AATGCAAGCC 
GATGAACGCA TGGTGGTGTT TGGTGAAGAC GTCGGCCATT TTGGCGGCGT GTTTCGCGCC 
ACCTCTGGTC TTCAAGAAAA ATTCGGTCGC GCTCGCTGCT TTAACACGCC ATTGACTGAG 
CAAGGTATTG CGGGTTTTGC CAACGGGTTA GCCTCCAATG GTATGACCGC CGTGGCGGAA 
ATCCAGTTTG CTGATTACAT CTTCCCAGCG TTTGATCAGA TTGTAAACGA GTCGGCTAAA 
TTCCGTTACC GCAGCGGTAA TGAGTTTAAT GTGGGAAGCC TTGTGTTCCG CACGCCCTAT 
GGTGGCGGTA TTGCAGGTGG TCACTATCAC TCACAATCGC CAGAAGCCTA CTTTACCCAA 
ACCCCTGGCT TAAAAGTGGT TGTGCCGCGT AATCCTGCGC AGGCCAAAGG GTTATTGCTT 
GCTTCGATTC GTGATAAAAA CCCAGTGGTG TTCTTCGAGC CTAAGCGTTT ATACCGCGCC 
TCTGTGGGTG ACGTGCCCGC TGGCGATTAT GAAATTGAGC TAGGTAAAGC CGAGGTGTTA 
CGCGAAGGTA AGGACATCAC GTTAGTGGCG TGGGGCGCGC AGATGGAAAT CATCGAGAAA 
GCGGCCGATA TGGCGGCTAA AGAGGGCATT TCCTGCGAAA TTATTGACCT ACGTACACTC 
GCACCATGGG ATGTGAATAC AGTTGCGGAT TCAGTGAAGA AAACGGGGCG ACTGCTCGTT 
AACCACGAAG CGCCATTAAC CGGTGGATTT GCTGGTGAAA TTGCGGCGAC GATCCAACAG 
GAGTGCTTCT TGTATTTAGA ATCACCCATC AGCCGTGTAT GTGGTTTAGA TACGCCATAT 
CCACTGGTTC ACGAAAAAGA ATATATGCCC GATGCGCTCA AAACATTTGA AGCCATCAAA 
GCATCAGTGA ACTTCTAG
 
Protein sequence
MAEMNMLQAV NEALSIAMQA DERMVVFGED VGHFGGVFRA TSGLQEKFGR ARCFNTPLTE 
QGIAGFANGL ASNGMTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFN VGSLVFRTPY 
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPAQAKGLLL ASIRDKNPVV FFEPKRLYRA 
SVGDVPAGDY EIELGKAEVL REGKDITLVA WGAQMEIIEK AADMAAKEGI SCEIIDLRTL 
APWDVNTVAD SVKKTGRLLV NHEAPLTGGF AGEIAATIQQ ECFLYLESPI SRVCGLDTPY 
PLVHEKEYMP DALKTFEAIK ASVNF