| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2339 |
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| Symbol | |
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| ID | 1170062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2446372 |
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| End bp | 2447550 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344176 |
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| Product | alpha keto acid dehydrogenase complex, E1 component, alpha subunit |
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| Protein accession | NP_717929 |
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| Protein GI | 24373886 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG CAACACTCAA CACTGATACA GTGCACCGTG TCGGCTTCTT GGATAAGGCA
TCGCTTCACA TTCCTATCCT TCGAATTCTA CAAGCAGACG GCACTACCTA TGAAACCGCG
GTTTTGCCTG TAATAGATGA AGCCTTAGCC ATCAAAATTT ACGATACTTG CGTGTTTACG
CGGGTACTCG ACGAACGTAT GTTAGGCGCC CAGCGTCAGG GACGGATCAG CTTCTATATG
ACCTGTACGG GTGAAGAAGC AGCGATCGTC GGCAGTGTCG CGGCACTCGA CCCTGAGGAT
GTGATCCTCG CGCAATATCG TGAACATGCG GCGCTGCGTT ACCGTGGCTT TACCACTGAG
CAGTTTATGA ACCAAATGTT CAGTAACGAA AAGGACTTAG GTAAAGGTCG CCAAATGCCT
ATTCACTACG GCTGCGCGGC GCTGAACTAT CAAACCATTT CATCGCCACT CGCCACTCAA
ATTCCGCAGG CTACAGGTGT CGGCTATAGC TTAAAAATGC AAGGCAAGCG CAATGTCGCT
GTTTGCTATT TTGGTGAAGG TGCTGCGTCG GAAGGCGATT TTCACGCCGG TTTGAATATG
GCGGCGGTAT TAAAATGCCC AGTGATATTC TTCTGCCGTA ACAATGGTTA TGCCATTTCT
ACCCCAACGG AAGAGCAATT TGCCGGTAAC GGCATCGCCA GTCGTGGCGT GGGTTACGGC
ATGCACACCA TTCGCGTCGA CGGCAATGAT ATGCTGGCAG TTTTGGCTGC AACTCAACAA
GCTCGTGCCT ATGCGATTGA GCACAACGCG CCAGTATTGA TTGAGGCCAT GACTTACCGC
CTTGGCGCTC ACTCCTCTTC AGACGACCCA TCTGGCTATC GTTCAAAAGA AGAAGAGGCT
AAATGGCAAC AACACGATCC GGTAAAACGC TTCAAGTTGT GGCTGATTAA CAAAGGCTGG
TTGGCCGAAG CCGATGATGC CCAGCGTTAC GAAAAGTACC GTGAAGAAGT GCTCGCCGCC
GTTAAAGTCG CCGAGAAGCT GCCTATCCCC ATGTTGGATG AGATTATTGA AGATGTGTAT
GACAAACCAA CGCCGGCGCT TAAAAAGCAA CTGAGCGAGC TCAAAGAACA CATCAAGAAA
TATCCGCAAT CCTATCCCAA AAGTGCAGGG AGGCTATAA
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| Protein sequence | MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDEALA IKIYDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDPED VILAQYREHA ALRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGCAALNY QTISSPLATQ IPQATGVGYS LKMQGKRNVA
VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKEEEA
KWQQHDPVKR FKLWLINKGW LAEADDAQRY EKYREEVLAA VKVAEKLPIP MLDEIIEDVY
DKPTPALKKQ LSELKEHIKK YPQSYPKSAG RL
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