| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2338 |
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| Symbol | astE |
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| ID | 1170061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2445175 |
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| End bp | 2446209 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344175 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | NP_717928 |
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| Protein GI | 24373885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTACAAG CTCTGTTAGA TTCGAAGGAT TTTCTCGCGC TGACCCTCGC CAATCCACAA
ACCCTCGGCG ATGAGTTTAG TTTCACCTTA GGGGAACATA CTCGGGTTAA TGTGTGGGAT
ACGGGCGTAA TTGTTTTTGA ACCAGCACAA CCCCAAGGTA AGGATGTTAT TCTCTCCTGC
GGTGTCCACG GTAATGAAAC CGCCCCCATT GAACTCTGCA ACACCTTAAT CAAACAGCTT
CTCCAACAAA AAATCATCGC CAAACAACGC ACACTCTTCC TGATCGGCAA TCCTCTAGCC
ATTAATAATG GCACCCGTAT TATCGATGAA AATATGAATC GTCTGTTTAG TGGTGAGCAC
TCTAATCCCC CTGGGTTAGT TAATCCTGAG CGGCTGCGGG CGAAAAAACT GGAAACCTAT
GTAGACCGTT TTTTTAAAGC CGCAGCCGCT GGGCGCCAGC GTATTCACTA TGATTTACAT
ACTGCAATGC GGGCGTCAAA GCATGAAAAG TTTGCGATTT ATCCCTATCG TCCCGGTCGC
GCTTATAGCG CAGAACAGAT CATGTTTTTA GCGGCCAGCG GCGTGGATAC CGTGTTGTTT
CACCATGAGC CGACAACTAC TTTTAGTTAT TTTTCTTCCG AGCAGTATGG CGCAGACGCT
TTTACCATTG AGTTAGGTAA GGTGTATCCC ATGGGACAAA ACGATATGAC ACGTTTTATT
GCTGCCCAAG AAATGTTTAC TCGCCTTATC ACCGACAAAC CCTTGCAGCT TGAGTCATTC
TCCACGGATA AAGTGAATCT GTATCAAGTG TGCCGGGTGA TTAACAAACA TTTCGATGAT
TTTGAATTTA CCTTCGCAAC CGATGTCGAA AACTTCAGAG CTTTTCCTAA AGGTTTTGTC
TTAGCCCGTG AGGGGGGGCA AGAAATTAAA GTAGAACAAG AGGTTGAATC TATTGTATTC
CCTAATGCCA AGGTGCCCAT TGGCAATCGA ACCGTGATTT GTCTGATCCC CTCAGTTGCG
CCGGATGTTC GTTAA
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| Protein sequence | MLQALLDSKD FLALTLANPQ TLGDEFSFTL GEHTRVNVWD TGVIVFEPAQ PQGKDVILSC
GVHGNETAPI ELCNTLIKQL LQQKIIAKQR TLFLIGNPLA INNGTRIIDE NMNRLFSGEH
SNPPGLVNPE RLRAKKLETY VDRFFKAAAA GRQRIHYDLH TAMRASKHEK FAIYPYRPGR
AYSAEQIMFL AASGVDTVLF HHEPTTTFSY FSSEQYGADA FTIELGKVYP MGQNDMTRFI
AAQEMFTRLI TDKPLQLESF STDKVNLYQV CRVINKHFDD FEFTFATDVE NFRAFPKGFV
LAREGGQEIK VEQEVESIVF PNAKVPIGNR TVICLIPSVA PDVR
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