Gene SO_2335 details

Gene Information

• Locus tag: SO_2335
• Symbol: seqA
• ID: 1170058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2442032
• End bp: 2442583
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637344172
• Product: replication initiation regulator SeqA
• Protein accession: NP_717925
• Protein GI: 24373882
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3057] Negative regulator of replication initiationR

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATACA TCGAAGTGGA TGAAGAGCTC TATCGTCATA TTGCCAGCAA AACGGAACGT 
ATTGGTGAGA GCGCCTCTGA CATTCTCCGT CGATTACTCG GCCTGTCCGT CGATACGGTT 
GAACAGGCAC AGCCACAGGC TATCAGCCAA CCGAGCTTAG AGGCTGCAAC GCCTGAACCA 
CAATTTGTGC CACAAGTCGA AACTTTTGTC GCTGCAGCTG ATTTTCATCA ATTGGTGGAT 
GAACATAAGT TGGAACAGCA AAAAGGTGCG GTGGGGCGAT TCTTATTTTT GCTCGAGAGC 
TTGTATCAAC TGAACAAAAC GCAGTTTGCA CAAATCTTAC AGATCCAAGG GCGCGATCGT 
CTTTACTTTG CGCGCTCCCG TGAGGAGTTA CTCAAGGCCA GCGCCACTGC AAATCCGAAG 
GAAATTGGCC AAACGGGTTT TTGGGTAACG ACCAACAACA ATACTGCGAA AAAGCGGGCC 
ATTTTAGCCG AGGCTTTGGT GCAATTTGGC TGCGATGCTG AAATCGCCAA CGGCATTGCC 
GAACGCGTAT AA 

 

Protein sequence

MKYIEVDEEL YRHIASKTER IGESASDILR RLLGLSVDTV EQAQPQAISQ PSLEAATPEP 
QFVPQVETFV AAADFHQLVD EHKLEQQKGA VGRFLFLLES LYQLNKTQFA QILQIQGRDR 
LYFARSREEL LKASATANPK EIGQTGFWVT TNNNTAKKRA ILAEALVQFG CDAEIANGIA 
ERV