Gene SO_2326 details

Gene Information

• Locus tag: SO_2326
• Symbol: cheD-2
• ID: 1170050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2436161
• End bp: 2436760
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637344164
• Product: chemotaxis protein CheD, putative
• Protein accession: NP_717916
• Protein GI: 24373873
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTTA ACCAAAGAAC GGTTGTCATG ATTGGCCCTG GTGAGCACTA TGTGACCGCA 
AAAAATGAAG TCATCAAAAC GCTATTGGGC TCATGTGTCG CCGTTTGTTT ATATGATCCT 
AAGGCTCAAG TGATTGGGAT GAATCACTTT TTATTAGCTG CCGATCGTCG CAAATTTACG 
CATTTTTTGG ATTCACGCGC AGGTTACTAT GGTGTACATG CCATGGAGAT CTTAATCAAT 
GCCATGTTAA AGCGTGGAGC ACAGCGGAAA TATTTGCAGA GTAAAATATT TGGAGGCGCG 
AATGTGTTGT CCTTATGTGC AGACAATATT CTTAATCACT ATGATATTGG CGGGATGAAT 
ATAGATTTTG TCAGACACTT TTTACAACGC GAACGTATCC CCATAATCAG TGAAGATATA 
GGTGGCCATT GTGGTCGAGT TATTTATTTT GATCCCACGG ATTATTCTGT TTATCGCAGT 
TTAATCGAGC ACAAATATGA AGAAATAGCT TCGCTTCAGG ATGAAGAATA TCGATATTTT 
AATCAAGCGA GTGAAGATAT CCATTCTTCG GGAGTCCCAG TAGTGATTTG GTCAGATTAG 

 

Protein sequence

MAFNQRTVVM IGPGEHYVTA KNEVIKTLLG SCVAVCLYDP KAQVIGMNHF LLAADRRKFT 
HFLDSRAGYY GVHAMEILIN AMLKRGAQRK YLQSKIFGGA NVLSLCADNI LNHYDIGGMN 
IDFVRHFLQR ERIPIISEDI GGHCGRVIYF DPTDYSVYRS LIEHKYEEIA SLQDEEYRYF 
NQASEDIHSS GVPVVIWSD