Gene SO_2307 details

Gene Information

• Locus tag: SO_2307
• Symbol: lolA
• ID: 1170032
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2419898
• End bp: 2420518
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637344150
• Product: outer membrane lipoprotein carrier protein LolA
• Protein accession: NP_717902
• Protein GI: 24373859
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TGTTATGTGC TGTGCTGTTA TCGCCCTTGT TATACAGCAA TGCAGTGTTG 
GCTGATGATG CCAAGCAATT ACGAGAGACC TTAACGGGTA CAGAATCTCT CAAGGCGGAT 
TTTAAGCAAA CCGTTACCGA TGTGAATAAA AAGGTCATTC AAAGCGGTGC GGGCGTATTT 
GCACTGGCTC ACCCTAATCA GTTTTATTGG CATTTAACCG CGCCAGATGA GTCAAAAATT 
GTCGCCGACG GTAAAGATTT ATGGATCTAC AACCCCTTTG CCGAAGAAGT GGTGATCATG 
GATTTTACCC AGGCCATTAC TGCATCGCCC ATCGCCTTAT TAGTTCACCG TGATGATGCT 
ACTTGGTCAC AGTACGCGGT GACGAAAAAA CAAGATTGTT ATGAGATCAA ACCTAAGGCG 
ACTGACGCCG GTATTTCTGC GGTCAATGTA TGTTTTAACA AAGGCACGCT GAATAAATTT 
AATGTGCTTG ACGATAAAGG AAATCTTAGC CAGTTTGACT TAAGCAACCA ACACAGCATT 
AGCACTGGGG ATAAAGCGCT CTTCAAATTT GTGCTACCGG ATAACGTTGA TGTTGATGAT 
CAACGTATTA AAACCCAATA G 

 

Protein sequence

MKKLLCAVLL SPLLYSNAVL ADDAKQLRET LTGTESLKAD FKQTVTDVNK KVIQSGAGVF 
ALAHPNQFYW HLTAPDESKI VADGKDLWIY NPFAEEVVIM DFTQAITASP IALLVHRDDA 
TWSQYAVTKK QDCYEIKPKA TDAGISAVNV CFNKGTLNKF NVLDDKGNLS QFDLSNQHSI 
STGDKALFKF VLPDNVDVDD QRIKTQ