Gene SO_2296 details

Gene Information

• Locus tag: SO_2296
• Symbol: ribE-1
• ID: 1170021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2408811
• End bp: 2409431
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637344140
• Product: riboflavin synthase subunit alpha
• Protein accession: NP_717892
• Protein GI: 24373849
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTG GTATAGTTCA AGCCACCTGC GAGGTGGTTG CAATACATAA GAAAGATGGC 
CTAAATACCC TTGAGGTAGC GTTTAAACCT GATTTGCATG AGGGACTTGC GATTGGAGCA 
AGTGTGGCAA ATAACGGGGT ATGTCTTACT GTGACTCAGG TTGTCGATGA TAGGGTATTT 
TTCGACGTAG TGGAAGAGAC CTTAAGATTG ACTAATCTGG CGGGTTTATC CGTGGGGCAG 
CATGTTAACA TTGAACGCTC GCTCACTTTT GGCAGTGAGA TTGGTGGTCA TATCTTATCA 
GGTCATATCC ATACTAAGGC AAAAGTATCC CATATTAGTC ATACCGCACA GCATTACGAT 
CTAACCTTGA GCGTCGAACC TAAGTGGATG AACTATATCC TTTATAAAGG CTTTGTCGGG 
GTAAATGGCT GTAGTCTAAC GGTTGGTGAG GTAACAGATT GCAGCTTTAT GCTGCACTTA 
ATTCCTGAAA CCCTTAAGTT GACCAATTTA GGCCAATGTC AGGTCGGAGA TGAGTTCAAC 
ATCGAAATTG ACAGCCAAAC CCAAGCGATT GTCGACACTG TCGAGCGTGT ATTGGCTAAA 
CGTTTTAACG GACTATCTTA A 

 

Protein sequence

MFTGIVQATC EVVAIHKKDG LNTLEVAFKP DLHEGLAIGA SVANNGVCLT VTQVVDDRVF 
FDVVEETLRL TNLAGLSVGQ HVNIERSLTF GSEIGGHILS GHIHTKAKVS HISHTAQHYD 
LTLSVEPKWM NYILYKGFVG VNGCSLTVGE VTDCSFMLHL IPETLKLTNL GQCQVGDEFN 
IEIDSQTQAI VDTVERVLAK RFNGLS