| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2286 |
|---|
| Symbol | |
|---|
| ID | 1170015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2400453 |
|---|
| End bp | 2402210 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637344132 |
|---|
| Product | sulfate permease family protein |
|---|
| Protein accession | NP_717882 |
|---|
| Protein GI | 24373839 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTTC CCAGTTTAGT ATCGTTTATG CCCGGCTTAG CGCTGATGCT GCAATATGAG
AAGCAATGGC TTAGGGATGA TGTGCGGGCG GGGTTATCCG TTGCAGCGGT TGCCTTGCCT
GTGGCTATTG CCTATGCCCA ACTTACTGGG GTGAATGCCG CCGTAGGCTT ATATTCTTGT
GTGTTACCCA TGTTAGTGTA TGCATTGTTT GGCACCTCAA GACAATTAAT CGTTGGGCCA
GATGCTGCCA CCTGTGCTGT TATCGCGGCC GTGGTAACTC CACTTGCCGC TGGCGACAGT
ATGAAACACT GGCAACTGGT GATGACCATG ACAGCGATGA CGGGCTTTTG GTGTTTGATC
GCCAGTCGTT TCCGTCTTGG TGTCTTGGCG GACTTTCTCT CTAAACCGAT TTTGATGGGG
TTACTCAATG GTGTGGCCAT TACCATTATT GTTGGTCAAT TTTCGAAAAT TTTCGGTTTC
ACTTTCGATG AGCGCTATTT AATCGAGCGA CTTTCCGGCG CACCTTCATA TTTAACCAAA
ACCCATTGGC CGACTTTACT GATGGGGTTA GTGACTTTGC TGACCTATGC TTTGGTAAAA
CGTTATCGCC CGCAGTGGCC TGCATCAATG TGCGCCATGG CGGTGGCAGC ATTTTTAGTG
TGGGCCTTTA ACTTAACCAG CTTTAACATC AATGTGGTGG GTGAGGTGAG TGCTGGGTTA
CCTTCGTTTC AAGCGCCAGT TTTCGATATA GGGATTGCCC GTGAATTAGT GGTACCCGCA
CTTAACCTTG CGATGGTGAG CTTTGTGAGT ATGATGCTCA CCGCACGAAG CTTTGCAGCT
AAGAATGGCT ATGATATTGA TGCAGATAAA GAATTTAGAG CATTAGGTAT TGCAAATATC
GCTTCTGCTT TATCTCAAGG TTTTGCGGTT AGCGGTGCTG ACTCACGCAC AGCGGTTAAC
GATGCTAACG GCGGTAAAAG TCAGCTTGTA TCGATTATTG CTGCAGTTTT AATTGCGCTT
GTTGCGCTGT TTTTTACTGC GCCGCTGAAA TATATTCCCA GCTCAGCCCT CGGCGTAGTG
TTAGTTATTG CCTCTATTTC GCTGATTGAT TTAAAGGCGC TATGGAATTT GCGAGTTAGG
GACCGTTCGG CCTTCTTACT TGCTTGTACA ACATTGTTCT CAGTATTGTT TATTGGTGTT
ATCCCCGGGA TCACCTTGGC AGTATTGCTC GGGTTATTCC AGTTTTTAGC GACCGTGATG
CGTCCAACGG ATCAAGTGTT AGGGCTCGAT CACAAAGGTG TTATTCGTAG TGTGGATGAT
TCTGGTAAGG CTAAATCTGT GCCTGGGGTA TTTATCTATC GTTTTAATTC GCCCTTAACC
TACTTCAATG CCACTTACTT TAAACGGCGG TTATTGGAGA AGTTTATCCG TGAGCCAGAT
CCTGTGGACT GTATCATTAT CGATGCAGTA CCTTGCTTTA CCCACTTGGA TTTAAGTGTG
ATGGCGATGC TTGCTGATCT GCATCAATTA TTAAAAAAGC GTGGAATACG TTTAGTGTTA
GCGGGCCGGA AAAGGCAGAT GCTCGGCTGG TTTGAACAGG CGGGGATGCA GTCAGGCGAG
GGCGGTATCT TAATTCGACC CGATTTATAT CTTGCACTGA AAATGAACCA AAGCTACAAA
CAAGCACTGG CAGAAGGACA GGCGCCCGTG ATCAAAAAAG CGCCTGAGGA TGATGTGTTA
TTATATAGCC ATTTATAG
|
|---|
| Protein sequence | MKFPSLVSFM PGLALMLQYE KQWLRDDVRA GLSVAAVALP VAIAYAQLTG VNAAVGLYSC
VLPMLVYALF GTSRQLIVGP DAATCAVIAA VVTPLAAGDS MKHWQLVMTM TAMTGFWCLI
ASRFRLGVLA DFLSKPILMG LLNGVAITII VGQFSKIFGF TFDERYLIER LSGAPSYLTK
THWPTLLMGL VTLLTYALVK RYRPQWPASM CAMAVAAFLV WAFNLTSFNI NVVGEVSAGL
PSFQAPVFDI GIARELVVPA LNLAMVSFVS MMLTARSFAA KNGYDIDADK EFRALGIANI
ASALSQGFAV SGADSRTAVN DANGGKSQLV SIIAAVLIAL VALFFTAPLK YIPSSALGVV
LVIASISLID LKALWNLRVR DRSAFLLACT TLFSVLFIGV IPGITLAVLL GLFQFLATVM
RPTDQVLGLD HKGVIRSVDD SGKAKSVPGV FIYRFNSPLT YFNATYFKRR LLEKFIREPD
PVDCIIIDAV PCFTHLDLSV MAMLADLHQL LKKRGIRLVL AGRKRQMLGW FEQAGMQSGE
GGILIRPDLY LALKMNQSYK QALAEGQAPV IKKAPEDDVL LYSHL
|
|---|
| |