| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2282 |
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| Symbol | |
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| ID | 1170011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2395756 |
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| End bp | 2397114 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344128 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_717878 |
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| Protein GI | 24373835 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTACAA TTTGGATACC TGATCTAGAC GTTTTTGTGG GCCCCAAATA TCAACGTCTT
GTCAGTGCAA TCGAACAGGG TATTTTGCAA AAAGAGCTTC CCCATGGCAC TAAACTCCCG
CCGCAGCGCC GGTTAGCTGA TGCCCTTGGG GTGACGATTG GCACTGTCAC ACGAGCCTAT
GCACTAGCAG AGCAACGCGG CTATGTTGAA GCGCGAATTG GCGATGGAAC ATACGTTAAT
GCCTCACCGG TGCCAGAAAT GGCTAATCTG CAACTCAATA TGGCAACTTG CCAACAACCC
TTGACGGATC AAATCAGCAC CCTTAGTGAT TGTTTAAGTC TTCTGGCGAA GGATCCCACC
AAGCTCAGCC AACTCCTTGG CTACCGTGCG AATCCCTTAG ATCAGCATCA ACAAACATTT
CACCATTGGC TTAAGCAACG TGGCATTGAG CAGCAATCAG AGCAACTAAT CTTTACCCAT
GGCGGTCAAC AGGCTATTTT TGCCTGCCTT AATGCCTTTC TGACCAAAGG AGATGTGCTA
CTGCACGAAC AATACTGTTA TCCAGGGATT CGTATTTGTG CCAAACAGTT AGGGATCAAT
AGCATTGGCG TACCACTGAC ATCAGAAGGA GTCGATTTAG TCAGATTTGA AGCCTTAGTG
CAGATCCATC GACCTAAGCT GATATACCTC ACCCTAAATA ATCAAAATCC GACTTGTATT
CAATACAGTG AGCAGCAAAG ACAACAACTG CTAGAACTCG CACAGCAGTA TCAATTTTAT
ATTATCGAGG ATGATGTCAA CTACTGTCTC CCAGAGGAAT GGCACTCTCC CCTTTGGCAA
TTAGCGCAGG TGCTTAATAT CCAAAGGGTG ATTTATATTT CGAGCCTGTC TAAGCTATTT
TCCGGAGGGC TAAGACAAGG TTTTATCTTA GTACCAGAGC CACTTATCGC TGCGCTACGA
CTTGCAATTC ATAGTCAATG CTGGATGGTA TCGCCACTCA ATGTGGAACT GGCCTGTCAG
TTAATTAAGC GTGGGCACAT TACCGCTAAT CGCGATGCGA TTATTCGCGA GCGTCAGCAG
CAATGCATTG CCCTTGGGCA ACGACTCGGA TTAACACAAC GCTGGCGAGG CTTAAATGGC
TGGATACAGT TACCAGAAGA CATTAAAGCG CACCATTTGG TAACCGCATT AGCCGCTAAA
GGCGTGTTGA TCCGCCATGG TGATGACTTT AACTGCCATG ATAACTTTAT CCGTTTAAGT
TTAGGCGGCG CCGAAAACGA TACCCAATTT CGACTGGCGA TTGAATGCAT TGAATCAACC
TTTAATGCCT TAAAGCAAAA TGCCTATTCC GTCGTTTAA
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| Protein sequence | MGTIWIPDLD VFVGPKYQRL VSAIEQGILQ KELPHGTKLP PQRRLADALG VTIGTVTRAY
ALAEQRGYVE ARIGDGTYVN ASPVPEMANL QLNMATCQQP LTDQISTLSD CLSLLAKDPT
KLSQLLGYRA NPLDQHQQTF HHWLKQRGIE QQSEQLIFTH GGQQAIFACL NAFLTKGDVL
LHEQYCYPGI RICAKQLGIN SIGVPLTSEG VDLVRFEALV QIHRPKLIYL TLNNQNPTCI
QYSEQQRQQL LELAQQYQFY IIEDDVNYCL PEEWHSPLWQ LAQVLNIQRV IYISSLSKLF
SGGLRQGFIL VPEPLIAALR LAIHSQCWMV SPLNVELACQ LIKRGHITAN RDAIIRERQQ
QCIALGQRLG LTQRWRGLNG WIQLPEDIKA HHLVTALAAK GVLIRHGDDF NCHDNFIRLS
LGGAENDTQF RLAIECIEST FNALKQNAYS VV
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