Gene SO_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2279 
SymbolilvI 
ID1170008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2389858 
End bp2391576 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content47% 
IMG OID637344125 
Productacetolactate synthase 3 catalytic subunit 
Protein accessionNP_717875 
Protein GI24373832 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGT TATCCGGCGC CAGCATGATT GTGCGTTCCC TTATTGATGA AGGTGTAAAG 
CACATTTTTG GTTATCCTGG CGGCTCAGTG TTAGATATCT ACGACGCCCT GCACCTTATC 
CCCGGTATTG AACATATCCT CGTTCGCCAC GAACAAGCCG CAGTGCATAT GGCCGATGGT 
TATGCCCGCG CCACGGGAAA AGTGGGTGTG GTATTAGTGA CCTCAGGTCC AGGCGCCACC 
AATGCGATTA CCGGTATCGC TACCGCTTAT ATGGATTCAA TTCCATTAGT AGTACTATCG 
GGCCAAGTAC CTAGCAATCT TATCGGTAAT GATGCCTTCC AAGAATGCGA CATGATTGGG 
ATTTCACGCC CCGTCGTCAA ACACAGCTTT TTAGTACAAG ATCCCACTCA AATTCCTGAG 
ATCATTAAAA AAGCCTTTTA TATTGCCTCC ACGGGTCGTC CCGGCCCCGT CGTGGTAGAC 
TTGCCCAAGG ATTGCCTCAA TCCAGCATTA CTGCACGACT ATATTTACCC CGAGAGCATA 
AAAATGCGCT CCTATAATCC AACGACATCG GGCCATAAAG GTCAAATTCG TCGAGGATTA 
CAGGCATTAT TAGCAGCGAA AAAACCCGTG CTGTATGTGG GCGGCGGCGC GATTATCTCA 
GGATCTGAAA AACAAATCTT AACGCTGGCA GAAAAATTAA ATATTCCCGT TATCAGCACC 
TTAATGGGTC TTGGCGCCTT CCCTGGCACC CACAAAAACA GCTTAGGTAT GCTGGGGATG 
CACGGTCGTT ACGAAGCTAA CATGGCGATG CATAACTGCG ATCTTATCTT TGGTATTGGC 
GTTCGTTTCG ATGATAGAAC CACCAATAAC ATTGAAAAAT ACTGCCCCAA TGCCACGATT 
TTGCATATTG ATATCGACCC ATCATCCATT TCAAAAACCG TAAGAGTAGA TATCCCTATT 
GTAGGTTCGG CCGATATCGT ATTGGATAGC ATATTGGCGC TGCTTGATGA AGCCAGTGAG 
ACCAATGATT TCGTTGCAAT CAATCAATGG TGGCAAGAGA TCACTACGTG GCGCAATCGT 
CAGTGCCTGG CATACGATAA AGAAAGTAAC CGGATCAAAC CACAACAAGT CATTGAAACC 
TTATATAAAC TCACCAATGG TGAGGCCTAT GTTGCTTCCG ATGTTGGTCA ACACCAGATG 
TTTGCCGCAC TATATTATCC CTTTGATAAA CCACGTCGTT GGATAAACTC CGGTGGCCTT 
GGCACCATGG GCTTTGGGTT ACCCGCTGCC ATGGGGGTCA AAATGGCGAT GCCAGACGAA 
ACCGTGGTCT GCGTAACCGG TGATGGTTCA ATTCAAATGA ACATTCAAGA ACTATCAACC 
GCTCTGCAAT ACGATACGCC AGTTAAAATT ATCAACTTAA ACAACCGTTT CCTTGGCATG 
GTGAAACAGT GGCAAGATAT GATCTACTCT GGTCGCCATT CCCATTCCTA TATGGATTCG 
GTACCTAATT TTGCAAAAAT TGCCGAAGCC TATGGCCATG TTGGCATGAC CATTAGCGAT 
CCCGCTGAGC TTGAATCTAA GATGGCCGAA GCCCTCGCCA TGAAAGACAG ACTGGTATTT 
ATCGATATTA TGGTGGATGA GACTGAGCAC GTTTACCCGA TGCTTATCCG CGGTGGAGCG 
ATGAACGAAA TGTGGTTAAG CAAAACGGAG AAGTGCTAA
 
Protein sequence
MEKLSGASMI VRSLIDEGVK HIFGYPGGSV LDIYDALHLI PGIEHILVRH EQAAVHMADG 
YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG 
ISRPVVKHSF LVQDPTQIPE IIKKAFYIAS TGRPGPVVVD LPKDCLNPAL LHDYIYPESI 
KMRSYNPTTS GHKGQIRRGL QALLAAKKPV LYVGGGAIIS GSEKQILTLA EKLNIPVIST 
LMGLGAFPGT HKNSLGMLGM HGRYEANMAM HNCDLIFGIG VRFDDRTTNN IEKYCPNATI 
LHIDIDPSSI SKTVRVDIPI VGSADIVLDS ILALLDEASE TNDFVAINQW WQEITTWRNR 
QCLAYDKESN RIKPQQVIET LYKLTNGEAY VASDVGQHQM FAALYYPFDK PRRWINSGGL 
GTMGFGLPAA MGVKMAMPDE TVVCVTGDGS IQMNIQELST ALQYDTPVKI INLNNRFLGM 
VKQWQDMIYS GRHSHSYMDS VPNFAKIAEA YGHVGMTISD PAELESKMAE ALAMKDRLVF 
IDIMVDETEH VYPMLIRGGA MNEMWLSKTE KC